RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ZNF878C9JN71 531 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 M0R233 179 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 CASQ2O14958 399 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-208ENST00000494334 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-208ENST00000494334 LYNP07948 512 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 MRPL3P09001 348 aaKnown RBP11.59□□□□□ -0.55
COL1A1-208ENST00000494334 PEX2P28328 305 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 EFNA4P52798 201 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 PSG7Q13046 419 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 GGTLC2Q14390 218 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 TAF13Q15543 124 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 ALKBH6Q3KRA9 238 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 RHOUQ7L0Q8 258 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 SLC16A9Q7RTY1 509 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 GID4Q8IVV7 300 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 ZNF454Q8N9F8 522 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 THEM6Q8WUY1 208 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 SPTSSAQ969W0 71 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 COG8Q96MW5 612 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 ZNF582Q96NG8 517 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-208ENST00000494334 RAB1BQ9H0U4 201 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 MS4A5Q9H3V2 200 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 FAM118AQ9NWS6 357 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 IMPAD1Q9NX62 359 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 SMPD3Q9NY59 655 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-208ENST00000494334 HAO2Q9NYQ3 351 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 KLHDC2Q9Y2U9 406 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 GMPPBQ9Y5P6 360 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 ARFGEF3Q5TH69 2177 aa11.59□□□□□ -0.55
COL1A1-208ENST00000494334 VPS13CQ709C8 3753 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 H3BSA7 217 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 SLC16A6O15403 523 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 SSX4O60224 188 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 LY6HO94772 140 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 LCATP04180 440 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 NAT2P11245 290 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 ALOX5APP20292 161 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 ANOS1P23352 680 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 HTR1FP30939 366 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 OPRL1P41146 370 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 SLC15A1P46059 708 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 PRKXP51817 358 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 NUDT6P53370 316 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 GRB2P62993 217 aaKnown RBP11.58□□□□□ -0.56
COL1A1-208ENST00000494334 MOGQ16653 247 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 NKPD1Q17RQ9 610 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 CLEC12BQ2HXU8 276 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 SLC25A30Q5SVS4 291 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 OGFRL1Q5TC84 451 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-208ENST00000494334 DRAM2Q6UX65 266 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 DNM1P46Q6ZS02 220 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 PACRGLQ8N7B6 248 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 OR5L1Q8NGL2 311 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 CMBLQ96DG6 245 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 Q96MF0 132 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 RDH12Q96NR8 316 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 YIPF3Q9GZM5 350 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 TPK1Q9H3S4 243 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 ADGRL4Q9HBW9 690 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 C8orf4Q9NR00 106 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 PTTG3PQ9NZH4 202 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 DNAJC27Q9NZQ0 273 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 NKX1-2Q9UD57 310 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-208ENST00000494334 WARS2Q9UGM6 360 aaKnown RBP11.58□□□□□ -0.56
COL1A1-208ENST00000494334 GPR160Q9UJ42 338 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 LAMP5Q9UJQ1 280 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 COPS3Q9UNS2 423 aa11.58□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-208ENST00000494334 GABRB1P18505 474 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 SLC6A9P48067 706 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 MMP15P51511 669 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 SNRPGP62308 76 aaKnown RBP11.57□□□□□ -0.56
COL1A1-208ENST00000494334 HLXQ14774 488 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-208ENST00000494334 FBXW12Q6X9E4 464 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF283Q8N7M2 679 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 OR51G2Q8NGK0 314 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 NEU4Q8WWR8 484 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-208ENST00000494334 GTF3AQ92664 365 aaKnown RBP11.57□□□□□ -0.56
COL1A1-208ENST00000494334 HAVCR1Q96D42 359 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 CNN2Q99439 309 aaKnown RBP11.57□□□□□ -0.56
COL1A1-208ENST00000494334 AASSQ9UDR5 926 aa11.57□□□□□ -0.56
COL1A1-208ENST00000494334 PURGQ9UJV8 347 aaKnown RBP11.57□□□□□ -0.56
COL1A1-208ENST00000494334 C5orf63A6NC05 138 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 C17orf100A8MU93 164 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 ENTPD6O75354 484 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 H2BFMP0C1H6 154 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 SBK2P0C263 348 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 SLC2A1P11166 492 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 RAC2P15153 192 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 KITLGP21583 273 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 HSD11B1P28845 292 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 CX3CR1P49238 355 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 SLC34A1Q06495 639 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 TMED1Q13445 227 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 OCLNQ16625 522 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 SNAI3Q3KNW1 292 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 MEDAGQ5VYS4 303 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 LRRN1Q6UXK5 716 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 OTOGQ6ZRI0 2925 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms