RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 MAGEE2Q8TD90 523 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF418Q8TF45 676 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 FAM216AQ8WUB2 273 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 C22orf15Q8WYQ4 148 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 YIPF5Q969M3 257 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZBTB9Q96C00 473 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 TRIM44Q96DX7 344 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 URB1-AS1Q96HZ7 61 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 TEX37Q96LM6 180 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF570Q96NI8 536 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 EMC6Q9BV81 110 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 MRPL37Q9BZE1 423 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 RBM38Q9H0Z9 239 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 PPP1R3EQ9H7J1 279 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF442Q9H7R0 627 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 NOX3Q9HBY0 568 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 MYEF2Q9P2K5 600 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 LOC100509620A0A075B734 347 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 RPL36A-HNRNPH2H7BZ11 118 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 TRIM77I1YAP6 450 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 FAAHO00519 579 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 SYNGR3O43761 229 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 NPIPB7O75200 414 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF432O94892 652 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 VAMP5O95183 116 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 LCATP04180 440 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 BPGMP07738 259 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 MSMBP08118 114 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 SAGP10523 405 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PNMTP11086 282 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF35P13682 527 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 HLA-DOBP13765 273 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PCMT1P22061 227 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 RPS4Y1P22090 263 aaKnown RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PAX7P23759 505 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 IL12AP29459 219 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 CRATP43155 626 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 TMEM33P57088 247 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 HILS1P60008 231 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 LMO4P61968 165 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 MYBPC1Q00872 1141 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 EGR4Q05215 589 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 C1DQ13901 141 aaKnown RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 GNA13Q14344 377 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PNLIPRP3Q17RR3 467 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 MS4A18Q3C1V0 323 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF311Q5JNZ3 666 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 AVPI1Q5T686 147 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 UGT2A3Q6UWM9 527 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF771Q7L3S4 317 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 NUDCD3Q8IVD9 361 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 WDFY1Q8IWB7 410 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 FOXRED2Q8IWF2 684 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PEX5LQ8IYB4 626 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 CNPY4Q8N129 248 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 GPR137CQ8N3F9 429 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 MFSD8Q8NHS3 518 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZFAND2BQ8WV99 257 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 OIT3Q8WWZ8 545 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 RDH5Q92781 318 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 TAAR8Q969N4 342 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 MRPL24Q96A35 216 aaKnown RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 TXNDC15Q96J42 360 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PKNOX2Q96KN3 472 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 HARBI1Q96MB7 349 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF48Q96MX3 618 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 OXGR1Q96P68 337 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 OR52E6Q96RD3 313 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PANX1Q96RD7 426 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 LINC00470Q9BZP3 86 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 C20orf27Q9GZN8 174 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 RACGAP1Q9H0H5 632 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 DENND2DQ9H6A0 471 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF275Q9NSD4 429 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-219ENST00000494323 B3GNT2Q9NY97 397 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 B3GAT1Q9P2W7 334 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 RASD1Q9Y272 281 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 GRIP1Q9Y3R0 1128 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 PCDHGB1Q9Y5G3 927 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 WNK1Q9H4A3 2382 aa4.37□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF99A8MXY4 864 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-219ENST00000494323 FTCDNL1E5RQL4 147 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 M0R233 179 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 PLPP2O43688 288 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 SERPINI2O75830 405 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 MPZL1O95297 269 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 AHSA1O95433 338 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 CLPTM1O96005 669 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 TOMM40O96008 361 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 HPRP00739 348 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 HIST1H2ABP04908 130 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 CCL2P13500 99 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 B4GALT1P15291 398 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 LBPP18428 481 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 ACHEP22303 614 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 CPT2P23786 658 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 GRPRP30550 384 aa4.36□□□□□ -1.71
PTCD3-219ENST00000494323 GLRXP35754 106 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms