RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GLI3P10071 1580 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 ECM29Q5VYK3 1845 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 LINC01387J3KSC0 135 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 TAAR5O14804 337 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 PPP2CBP62714 309 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 PPP2CAP67775 309 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 TMEM41BQ5BJD5 291 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 FBXL6Q8N531 539 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 EXD3Q8N9H8 876 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 OR51F2Q8NH61 342 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 CCL4L1Q8NHW4 92 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-207ENST00000494090 EMDP50402 254 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 BHLHE23Q8NDY6 225 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 ARHGDIGQ99819 225 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 TXNIPQ9H3M7 391 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 CRLF2Q9HC73 371 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 TRAV1-2A0A0B4J238 106 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 A0A1B0GUH1 482 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 SNRPGP15A8MWD9 76 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 CLEC3BP05452 202 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 DUSP1P28562 367 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 TAGLNQ01995 201 aaKnown RBP17.38■□□□□ 0.37
COL27A1-207ENST00000494090 PRAMEF5Q5TYX0 476 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 AGBL4Q5VU57 503 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 PRAMEF6Q5VXH4 476 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 OR5M1Q8NGP8 315 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 ZIC2O95409 532 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-207ENST00000494090 ADRA2CP18825 462 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 AGERQ15109 404 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 TMEM217Q8N7C4 229 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 SLC22A11Q9NSA0 550 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 IGLV3-16A0A075B6K0 115 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 EFSO43281 561 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 HPNP05981 417 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 UBE2G2P60604 165 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 CCDC190Q86UF4 302 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 POMT2Q9UKY4 750 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 SLC17A4Q9Y2C5 497 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 PPIL1Q9Y3C6 166 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 MAGEB4O15481 346 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-207ENST00000494090 IGHV3-9P01782 118 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 NKX2-1P43699 371 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-207ENST00000494090 SLC17A1Q14916 467 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 SHBQ15464 509 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 BAK1Q16611 211 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 C2orf76Q3KRA6 126 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 BHLHA9Q7RTU4 235 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 SLC38A9Q8NBW4 561 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 KIAA1456Q9P272 454 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 A4GNTQ9UNA3 340 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 R4GMQ9 66 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 MN1Q10571 1320 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-207ENST00000494090 METTL12A8MUP2 240 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 LMO7DNF2Z398 122 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 GUSBP08236 651 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 ACOT7LQ6ZUV0 252 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 TRIB1Q96RU8 372 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 CSAG2Q9Y5P2 127 aa17.37■□□□□ 0.37
COL27A1-207ENST00000494090 PRSS36Q5K4E3 855 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 TNFSF15O95150 251 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 ZGLP1P0C6A0 271 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 ALOX5APP20292 161 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 SKA3Q8IX90 412 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 OR13C8Q8NGS7 320 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 TSLPQ969D9 159 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 CCDC74BQ96LY2 380 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 CCDC187A0A096LP49 1063 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 SERTM1A2A2V5 107 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 TMEM235A6NFC5 223 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 CBR3O75828 277 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 GABRA4P48169 554 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 FZD2Q14332 565 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 RTL8BQ17RB0 113 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 ASTLQ6HA08 431 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-207ENST00000494090 KCNRGQ8N5I3 272 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 MITD1Q8WV92 249 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 S1PR3Q99500 378 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 SLC25A32Q9H2D1 315 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 TBX19O60806 448 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 TMEM196Q5HYL7 178 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 IL34Q6ZMJ4 242 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 ETFBKMTQ8IXQ9 262 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 OR5AS1Q8N127 324 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 PLK3Q9H4B4 646 aa17.36■□□□□ 0.37
COL27A1-207ENST00000494090 RAE1P78406 368 aaKnown RBP17.35■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF85Q03923 595 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 KIAA0040Q15053 153 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF718Q3SXZ3 478 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 XAF1Q6GPH4 301 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 MSRB3Q8IXL7 192 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 HS3ST1O14792 307 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 BATFQ16520 125 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 IER2Q9BTL4 223 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 KPTNQ9Y664 436 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 SDK1Q7Z5N4 2213 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 ANKRD61A6NGH8 418 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 NRASP01111 189 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 C1QAP02745 245 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms