RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 FAM240BA0A1B0GVZ2 78 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 FAM230AA0A1W2PPH8 454 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 HELTA6NFD8 242 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 K7ERU9 68 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 SLC1A7O00341 560 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 EI24O14681 340 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 RP2O75695 350 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 KLF7O75840 302 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-222ENST00000493919 CLIC3O95833 236 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 FADS2O95864 444 aaKnown RBP10.41□□□□□ -0.74
BRCA1-222ENST00000493919 WNT11O96014 354 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 SERPINA1P01009 418 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 CSF3P09919 207 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 ZGLP1P0C6A0 271 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 FAM157BP0CG42 384 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 CTSSP25774 331 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 SSR2P43308 183 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
BRCA1-222ENST00000493919 VMACQ2NL98 169 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 TMEM249Q2WGJ8 235 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 CDPF1Q6NVV7 123 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 LINC00696Q6ZRV3 163 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 FGD2Q7Z6J4 655 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 OR51Q1Q8NH59 317 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 LCORQ96JN0 433 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-222ENST00000493919 TMPRSS13Q9BYE2 586 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 AUNIPQ9H7T9 357 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 WDR54Q9H977 334 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 GALNT9Q9HCQ5 603 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 NXT1Q9UKK6 140 aaKnown RBP10.41□□□□□ -0.74
BRCA1-222ENST00000493919 SAMD4AQ9UPU9 718 aaKnown RBP10.41□□□□□ -0.74
BRCA1-222ENST00000493919 EXOGQ9Y2C4 368 aaKnown RBP10.41□□□□□ -0.74
BRCA1-222ENST00000493919 NPTNQ9Y639 398 aa10.41□□□□□ -0.74
BRCA1-222ENST00000493919 CCDC88CQ9P219 2028 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 UBFD1O14562 309 aaKnown RBP10.4□□□□□ -0.74
BRCA1-222ENST00000493919 MT-ATP6P00846 226 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 BPGMP07738 259 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 FURINP09958 794 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 MAKP20794 623 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 PSMB9P28065 219 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 DCTDP32321 178 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 IDH3AP50213 366 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 CRYBA4P53673 196 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 ERVFC1-1P60608 527 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 CLINT1Q14677 625 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 ABHD17CQ6PCB6 329 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 LINC01551Q86U37 167 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 HAVCR1Q96D42 359 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 S100A13Q99584 98 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 PRR14Q9BWN1 585 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 SEC11CQ9BY50 192 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-222ENST00000493919 ZNF222Q9UK12 451 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 PTGDR2Q9Y5Y4 395 aa10.4□□□□□ -0.74
BRCA1-222ENST00000493919 CACNA1BQ00975 2339 aa10.4□□□□□ -0.75
BRCA1-222ENST00000493919 A0A087WUJ7 227 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 SMIM30A4D0T7 59 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 DVL1O14640 695 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 WIPF1O43516 503 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 SSNA1O43805 119 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 B3GALT2O43825 422 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 ETHE1O95571 254 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 PDYNP01213 254 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 PMP2P02689 132 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 UMODP07911 640 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 HTR6P50406 440 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 FOXA1P55317 472 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 DEFB109BQ30KR1 87 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 GLYR1Q49A26 553 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 SLC22A6Q4U2R8 563 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 COL5A1-AS1Q5SY13 56 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 PLCXD3Q63HM9 321 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 UNQ9370/PRO34162Q6UXP9 181 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 LAPTM4BQ86VI4 370 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 PTRH1Q86Y79 214 aaKnown RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 OR4F15Q8NGB8 312 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 OR10D4PQ8NGN7 298 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 OR10R2Q8NGX6 335 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 APIPQ96GX9 242 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 IL1RL2Q9HB29 575 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF629Q9UEG4 869 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 NDRG4Q9ULP0 352 aaKnown RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 PPT2Q9UMR5 302 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 GSTK1Q9Y2Q3 226 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 SMG1Q96Q15 3661 aaKnown RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 IGLV3-12A0A075B6K2 115 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 IDSB3KWA1 339 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 MANBAO00462 879 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 PLA2G10O15496 165 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 KIAA0513O60268 411 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 FBXO24O75426 580 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 BRI3O95415 125 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 ANXA4P09525 319 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 SMIM10L1P0DMW3 83 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 IRF2P14316 349 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 CSNK2A2P19784 350 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 MPZP25189 248 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 IDH2P48735 452 aaKnown RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 NPY4RP50391 375 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 MLF1P58340 268 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms