RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TMEM208Q9BTX3 173 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 PTDSS2Q9BVG9 487 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 RHOFQ9HBH0 211 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 A0A1B0GTW7 788 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 EIF4E2O60573 245 aaKnown RBP7.18□□□□□ -1.26
BRCA1-221ENST00000493795 QDPRP09417 244 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 ARSAP15289 507 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 PPP2CBP62714 309 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 ZNF141Q15928 474 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 YOD1Q5VVQ6 348 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM81Q6P7N7 255 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 CORO6Q6QEF8 472 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 DHRS13Q6UX07 377 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 HSD17B13Q7Z5P4 300 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-221ENST00000493795 WDTC1Q8N5D0 677 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 OR5D13Q8NGL4 314 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 OR51E1Q8TCB6 317 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 TTC9Q92623 222 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 SPOCK3Q9BQ16 436 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 SIRT3Q9NTG7 399 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-221ENST00000493795 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 PROCRQ9UNN8 238 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 USP22Q9UPT9 525 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 NPTNQ9Y639 398 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 M0R1B8 84 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 XRCC2O43543 280 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 DEDDO75618 318 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 OR2J2O76002 312 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 IL5P05113 134 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 GUSBP08236 651 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 SLC10A3P09131 477 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 SLC35E2P0CK97 266 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 CTSAP10619 480 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 TBXA2RP21731 343 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 OR1L4Q8NGR5 311 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 SLCO4A1Q96BD0 722 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 INSM2Q96T92 566 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-221ENST00000493795 C1QTNF3Q9BXJ4 246 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 SEC11CQ9BY50 192 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 PLSCR3Q9NRY6 295 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 GDE1Q9NZC3 331 aa7.18□□□□□ -1.26
BRCA1-221ENST00000493795 OR2A25A4D2G3 310 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 MS4A18H0YCH9 400 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 GCGP01275 180 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 ANKRD34CP0C6C1 535 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 IQCF3P0C7M6 154 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 GCAP28676 217 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 TAS2R60P59551 318 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-221ENST00000493795 MS4A18Q3C1V0 323 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 LAIR1Q6GTX8 287 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 Q6ZN92 141 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 UBALD1Q8TB05 177 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 CHST6Q9GZX3 395 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 PRRG2O14669 202 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 SEMA7AO75326 666 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 PRSS1P07477 247 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 GNG4P50150 75 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 DLX1P56177 255 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 PPP1CAP62136 330 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 OTUD1Q5VV17 481 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-221ENST00000493795 LYG2Q86SG7 212 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 NANOGP1Q8N7R0 232 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 C3orf30Q96M34 536 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM191AQ9H0A3 160 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 CLEC5AQ9NY25 188 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 CEP152O94986 1710 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 DIP2CQ9Y2E4 1556 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 ANKRD61A6NGH8 418 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 SNRPGP15A8MWD9 76 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 DNASE2O00115 360 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-221ENST00000493795 SIAH2O43255 324 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 AKR7A3O95154 331 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 ZBTB25P24278 435 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 RPL29P47914 159 aaKnown RBP7.17□□□□□ -1.26
BRCA1-221ENST00000493795 YPEL5P62699 121 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 RHOBP62745 196 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 AANATQ16613 207 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 ATP6V1FQ16864 119 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 FCRL6Q6DN72 434 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 Q6ZNX1 250 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 DEFB108BQ8NET1 73 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 OR1L1Q8NH94 360 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 RDH5Q92781 318 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 PDLIM5Q96HC4 596 aaKnown RBP7.17□□□□□ -1.26
BRCA1-221ENST00000493795 TP53RKQ96S44 253 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 KIF1AQ12756 1690 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 NRASP01111 189 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 OR4E1P0C645 316 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM88Q6PEY1 159 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 ZC3H3Q8IXZ2 948 aaKnown RBP7.17□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM37Q8WXS4 190 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 HGDQ93099 445 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 SLAMF6Q96DU3 332 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM56Q96MV1 263 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 ADAT1Q9BUB4 502 aaKnown RBP7.17□□□□□ -1.26
BRCA1-221ENST00000493795 TRAPPC4Q9Y296 219 aa7.17□□□□□ -1.26
BRCA1-221ENST00000493795 BAZ2BQ9UIF8 2168 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 H0YIV9 168 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms