RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ECH1Q13011 328 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 EIF2B1Q14232 305 aaKnown RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 GGTLC2Q14390 218 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 PTGES3Q15185 160 aaKnown RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 TSTQ16762 297 aaKnown RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 HIST2H3PS2Q5TEC6 136 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 HIST2H3AQ71DI3 136 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 PARP8Q8N3A8 854 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 OR5L1Q8NGL2 311 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 UBASH3BQ8TF42 649 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 GTF3AQ92664 365 aaKnown RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 STMN2Q93045 179 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 SPTSSAQ969W0 71 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 APOBEC3DQ96AK3 386 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 ZMYND19Q96E35 227 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 COG8Q96MW5 612 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 DCLRE1CQ96SD1 692 aaKnown RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 CIB1Q99828 191 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 POFUT1Q9H488 388 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 RIBC2Q9H4K1 309 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 MYOZ1Q9NP98 299 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 TBCCD1Q9NVR7 557 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 ENOPH1Q9UHY7 261 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 ATPIF1Q9UII2 106 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 ORC6Q9Y5N6 252 aa8.9□□□□□ -0.98
TRAPPC12-222ENST00000493792 IGLV3-9A0A075B6K5 115 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 LOC390937A0A1W2PQ73 354 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 C17orf100A8MU93 164 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 LYNX1G3V0Z9 82 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 PHF1O43189 567 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 BAG2O95816 211 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 IGHV3-13P01766 116 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 HPXP02790 462 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 LYNX1P0DP58 116 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 PSKH1P11801 424 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 NAA10P41227 235 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 MAGEB1P43366 347 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 PRKXP51817 358 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 CCL8P80075 99 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 MALLQ13021 153 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 APOFQ13790 326 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 MBNL2Q5VZF2 373 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 KDM4DQ6B0I6 523 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 SHFQ7M4L6 423 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 DPY19L4Q7Z388 723 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 OR5AS1Q8N127 324 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZNF283Q8N7M2 679 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 BBS1Q8NFJ9 593 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 C10orf105Q8TEF2 133 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 PTP4A1Q93096 173 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 CMBLQ96DG6 245 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLAMF6Q96DU3 332 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 MAP6Q96JE9 813 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 RBM4BQ9BQ04 359 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 GABARAPL1Q9H0R8 117 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 DECR2Q9NUI1 292 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 H2AFY2Q9P0M6 372 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 SVEP1Q4LDE5 3571 aa8.89□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZNF878C9JN71 531 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 H3BNX3 289 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 H3BSA7 217 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 M0R135 149 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 PRODHO43272 600 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 TLX2O43763 284 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 PRKYO43930 277 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 SELENOFO60613 162 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 ICMTO60725 284 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 CDC14BO60729 498 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 ACSM4P0C7M7 580 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLC25A16P16260 332 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 TUBG1P23258 451 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 HSD11B1P28845 292 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLC15A1P46059 708 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 PSG7Q13046 419 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 HLXQ14774 488 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZMAT1Q5H9K5 638 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 LINC01590Q5TEZ4 76 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 LCN1P1Q5VSP4 162 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLX4IPQ5VYV7 408 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 NAA40Q86UY6 237 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 TCEANCQ8N8B7 351 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 BHLHE23Q8NDY6 225 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 OR10S1Q8NGN2 331 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 THEM6Q8WUY1 208 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 RDH5Q92781 318 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZNF799Q96GE5 643 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 IL4I1Q96RQ9 567 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 MSL2Q9HCI7 577 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 S100A14Q9HCY8 104 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 PNRC2Q9NPJ4 139 aaKnown RBP8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 TUBG2Q9NRH3 451 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 CYSLTR2Q9NS75 346 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 DNAJC27Q9NZQ0 273 aa8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 TMEFF2Q9UIK5 374 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 PURGQ9UJV8 347 aaKnown RBP8.88□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZSCAN5BA6NJL1 495 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZAR1LA6NP61 321 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 NDUFS8O00217 210 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms