RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 MVKQ03426 396 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 DAZAP2Q15038 168 aaPredicted RBP10.79□□□□□ -0.68
SNX17-208ENST00000493711 KRTAP27-1Q3LI81 207 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 ZNF684Q5T5D7 378 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 OTPQ5XKR4 325 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 ZNF773Q6PK81 442 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 MEX3BQ6ZN04 569 aaKnown RBP10.79□□□□□ -0.68
SNX17-208ENST00000493711 LHFPL3Q86UP9 236 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 YIPF7Q8N8F6 280 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 CPEB3Q8NE35 698 aaKnown RBP10.79□□□□□ -0.68
SNX17-208ENST00000493711 OR10S1Q8NGN2 331 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 ITFG2Q969R8 447 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 ITPKCQ96DU7 683 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 ZC3HAV1LQ96H79 300 aaKnown RBP10.79□□□□□ -0.68
SNX17-208ENST00000493711 POM121L2Q96KW2 1035 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 PSMG3-AS1Q96PY0 264 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 SIGLEC11Q96RL6 698 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 CCDC90BQ9GZT6 254 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 MOB1AQ9H8S9 216 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 NOX3Q9HBY0 568 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 SLCO1C1Q9NYB5 712 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 ERVK-18Q9QC07 812 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 KCNN3Q9UGI6 736 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 USP9YO00507 2555 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 IGHV1-18A0A0C4DH31 117 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 C5orf49A4QMS7 147 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 M0R135 149 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 ICMTO60725 284 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 CECR9P0C854 216 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 PSKH1P11801 424 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 CD40P25942 277 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 C21orf33P30042 268 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 RAD52P43351 418 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 ETV1P50549 477 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 GBX2P52951 348 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 TAS2R43P59537 309 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 RPS23P62266 143 aaKnown RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 GALK2Q01415 458 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 NAAAQ02083 359 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 BDH1Q02338 343 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 IRF3Q14653 427 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 TBCEQ15813 527 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 CCDC58Q4VC31 144 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 LCE2AQ5TA79 106 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 LCE2CQ5TA81 110 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 ALKBH2Q6NS38 261 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 LRRN1Q6UXK5 716 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 ZNF584Q8IVC4 421 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 ZNF283Q8N7M2 679 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 NANOGP1Q8N7R0 232 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 OR52H1Q8NGJ2 320 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 OR5L1Q8NGL2 311 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 SMAP2Q8WU79 429 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 FCGR1BQ92637 280 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 ZNF799Q96GE5 643 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 AMELYQ99218 206 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 RHNO1Q9BSD3 238 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 C1QTNF6Q9BXI9 259 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 PAK1IP1Q9NWT1 392 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 BABAM2Q9NXR7 383 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 MRM2Q9UI43 246 aaKnown RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 GNG8Q9UK08 70 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 LRP12Q9Y561 859 aa10.78□□□□□ -0.68
SNX17-208ENST00000493711 NCOA6Q14686 2063 aaPredicted RBP10.78□□□□□ -0.68
SNX17-208ENST00000493711 SPENQ96T58 3664 aaKnown RBP10.77□□□□□ -0.68
SNX17-208ENST00000493711 DOPEY1Q5JWR5 2465 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 LOC100509620A0A075B734 347 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 IGHV2OR16-5A0A0B4J2B6 119 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 MAGEA13PA6NCF6 341 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 VSTM5A8MXK1 200 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 F5H5K5 113 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 J3QLW9 94 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 MT-ND2P03891 347 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 CD3EP07766 207 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 ACSM4P0C7M7 580 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 COX6B1P14854 86 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 ZNF19P17023 458 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 WNT4P56705 351 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 PSMA6P60900 246 aaKnown RBP10.77□□□□□ -0.69
SNX17-208ENST00000493711 NCMAPQ5T1S8 102 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 FDX2Q6P4F2 183 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 C22orf34Q6ZV56 151 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 SPATC1Q76KD6 591 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 TSPAN14Q8NG11 270 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 APOBEC3DQ96AK3 386 aaPredicted RBP10.77□□□□□ -0.69
SNX17-208ENST00000493711 C4orf36Q96KX1 117 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 C4orf45Q96LM5 186 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 DOK1Q99704 481 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 OCSTAMPQ9BR26 566 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 ZNF649Q9BS31 505 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 BCL2L14Q9BZR8 327 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 OPA3Q9H6K4 179 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 ISYNA1Q9NPH2 558 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 TRIM36Q9NQ86 728 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 TBCCD1Q9NVR7 557 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 NPAP1Q9NZP6 1156 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 CRIM1Q9NZV1 1036 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms