RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 SLC30A2Q9BRI3 323 aa13.95□□□□□ -0.18
PTPRU-208ENST00000493601 FUZQ9BT04 418 aa13.95□□□□□ -0.18
PTPRU-208ENST00000493601 HCAR1Q9BXC0 346 aa13.95□□□□□ -0.18
PTPRU-208ENST00000493601 MED4Q9NPJ6 270 aa13.95□□□□□ -0.18
PTPRU-208ENST00000493601 ADA2Q9NZK5 511 aa13.95□□□□□ -0.18
PTPRU-208ENST00000493601 ZNF69Q9UC07 566 aa13.95□□□□□ -0.18
PTPRU-208ENST00000493601 DNAJC9-AS1A6NH13 148 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 DCTN6O00399 190 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 GADD45GO95257 159 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 PRTN3P24158 256 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 SPIBQ01892 262 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 FOXL1Q12952 345 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 ECH1Q13011 328 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 ZNF181Q2M3W8 571 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 KLF17Q5JT82 389 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-208ENST00000493601 CORO6Q6QEF8 472 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 BTNL3Q6UXE8 466 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 SLC26A10Q8NG04 563 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 ZNF420Q8TAQ5 688 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-208ENST00000493601 PLEKHA8Q96JA3 519 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 NMNAT3Q96T66 252 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 MIOXQ9UGB7 285 aa13.94□□□□□ -0.18
PTPRU-208ENST00000493601 ARPC3O15145 178 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 MLNRO43193 412 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 FSTL3O95633 263 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 CYB5R3P00387 301 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-208ENST00000493601 WNT2P09544 360 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 PPIAL4GP0DN37 164 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 HKR1P10072 659 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 EGR1P18146 543 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 FPR3P25089 353 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 NOS3P29474 1203 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 PRDX6P30041 224 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 GNB2P62879 340 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 PAX8Q06710 450 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 RFX4Q33E94 735 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 SLC36A3Q495N2 470 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 LRRN1Q6UXK5 716 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 COLCA1Q6ZS62 124 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 NLRC3Q7RTR2 1065 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 MOGAT3Q86VF5 341 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 KLBQ86Z14 1044 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 OR6V1Q8N148 313 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 OR2AJ1Q8NGZ0 328 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 PITX2Q99697 317 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 ATF6BQ99941 703 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 IFT27Q9BW83 186 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 C1QTNF5Q9BXJ0 243 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 MS4A7Q9GZW8 240 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-208ENST00000493601 MYLK2Q9H1R3 596 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 OR52D1Q9H346 318 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 GORASP2Q9H8Y8 452 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 RPRD1BQ9NQG5 326 aaKnown RBP13.93□□□□□ -0.18
PTPRU-208ENST00000493601 TMEM100Q9NV29 134 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 MAGEL2Q9UJ55 1249 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 B9D1Q9UPM9 204 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 V9GYQ6 96 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 MEGF8Q7Z7M0 2845 aa13.93□□□□□ -0.18
PTPRU-208ENST00000493601 PKD1L1Q8TDX9 2849 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 A0A1B0GWJ7 208 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 F5H5P2 479 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 H0YL77 283 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 SEMG1P04279 462 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 ACSM4P0C7M7 580 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 IRF2P14316 349 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 HIST1H1CP16403 213 aaKnown RBP13.92□□□□□ -0.18
PTPRU-208ENST00000493601 IFNGR2P38484 337 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 TRAP1Q12931 704 aaKnown RBP13.92□□□□□ -0.18
PTPRU-208ENST00000493601 MALLQ13021 153 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 BAMBIQ13145 260 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 KRTAP27-1Q3LI81 207 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 ZNF404Q494X3 552 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 SLC18B1Q6NT16 456 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 CFAP77Q6ZQR2 320 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 ZBTB46Q86UZ6 589 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 LINC00346Q8IVM7 164 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 PARP8Q8N3A8 854 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 RNF148Q8N7C7 305 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 OR8B3Q8NGG8 313 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 OR52E2Q8NGJ4 325 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 SLC25A28Q96A46 364 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 MCUR1Q96AQ8 359 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 NEIL1Q96FI4 390 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-208ENST00000493601 PYURFQ96I23 114 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 DUX5Q96PT3 197 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 OR8B2Q96RD0 313 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 CDADC1Q9BWV3 514 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 WDR76Q9H967 626 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 TMEM165Q9HC07 324 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 SRA1Q9HD15 236 aaKnown RBP13.92□□□□□ -0.18
PTPRU-208ENST00000493601 PCDHGB1Q9Y5G3 927 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 MGAM2Q2M2H8 2515 aa13.92□□□□□ -0.18
PTPRU-208ENST00000493601 DOCK11Q5JSL3 2073 aa13.91□□□□□ -0.18
PTPRU-208ENST00000493601 IGHV2-70DA0A0C4DH43 119 aa13.91□□□□□ -0.18
PTPRU-208ENST00000493601 F5H5K5 113 aa13.91□□□□□ -0.18
PTPRU-208ENST00000493601 IDH3BO43837 385 aa13.91□□□□□ -0.18
PTPRU-208ENST00000493601 OR10H3O60404 316 aa13.91□□□□□ -0.18
PTPRU-208ENST00000493601 ZNF205O95201 554 aa13.91□□□□□ -0.18
PTPRU-208ENST00000493601 HLA-DQA2P01906 255 aa13.91□□□□□ -0.18
PTPRU-208ENST00000493601 CD80P33681 288 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms