RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GORASP2Q9H8Y8 452 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 RPRD1BQ9NQG5 326 aaKnown RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 MAN2C1Q9NTJ4 1040 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 INTS9Q9NV88 658 aaKnown RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 SCOCQ9UIL1 159 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ERGIC3Q9Y282 383 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 C12orf71A8MTZ7 269 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF879B4DU55 563 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 SURF4O15260 269 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 EDF1O60869 148 aaKnown RBP7.73□□□□□ -1.17
HDAC3-212ENST00000492407 PRSS23O95084 383 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 SLC2A10O95528 541 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 FSTL3O95633 263 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 GLAP06280 429 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 PPIAL4GP0DN37 164 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 EGR1P18146 543 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 TNFRSF1AP19438 455 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 MAKP20794 623 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 GSTM3P21266 225 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 CCNOP22674 350 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 TNFSF4P23510 183 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 WNT5AP41221 380 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 SLC9A3P48764 834 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 PPP1CBP62140 327 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 CDK5R2Q13319 367 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 LAPTM4AQ15012 233 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 SGCAQ16586 387 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 TSTQ16762 297 aaKnown RBP7.73□□□□□ -1.17
HDAC3-212ENST00000492407 MTX3Q5HYI7 312 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 RBMS3Q6XE24 437 aaKnown RBP7.73□□□□□ -1.17
HDAC3-212ENST00000492407 UTS2BQ765I0 119 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 ICA1LQ8NDH6 482 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 MOSPD2Q8NHP6 518 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 PFN4Q8NHR9 129 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 SLC25A40Q8TBP6 338 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 DVL3Q92997 716 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-212ENST00000492407 LRRC58Q96CX6 371 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 BPIFA2Q96DR5 249 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 C4orf45Q96LM5 186 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF583Q96ND8 569 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 TXN2Q99757 166 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF747Q9BV97 191 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 OR2J1Q9GZK6 312 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 OR51B6Q9H340 312 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 GHITMQ9H3K2 345 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 C20orf141Q9NUB4 165 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 DDX28Q9NUL7 540 aaKnown RBP7.73□□□□□ -1.17
HDAC3-212ENST00000492407 OPN4Q9UHM6 478 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 NPTNQ9Y639 398 aa7.73□□□□□ -1.17
HDAC3-212ENST00000492407 ZSCAN5BA6NJL1 495 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 A8MXK9 166 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 SPRY3O43610 288 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 IGHV2-70P01814 119 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 HKR1P10072 659 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 CLUP10909 449 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 KITLGP21583 273 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 MSR1P21757 451 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 CDAP32320 146 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 KDELR2P33947 212 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 BMI1P35226 326 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 MPV17P39210 176 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 P2RX3P56373 397 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 SELENOWP63302 87 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 CD47Q08722 323 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 PRR31Q5SQ13 230 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 SLC27A4Q6P1M0 643 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 SHISA2Q6UWI4 295 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 THSD4Q6ZMP0 1018 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 DOK3Q7L591 496 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 LRRC28Q86X40 367 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-212ENST00000492407 KLHL36Q8N4N3 616 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF283Q8N7M2 679 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 ZDHHC22Q8N966 263 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 PCYOX1LQ8NBM8 494 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 AKR7LQ8NHP1 331 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 LHFPL5Q8TAF8 219 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 ABHD4Q8TB40 342 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 NSMAFQ92636 917 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 PRRC1Q96M27 445 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 CHCHD6Q9BRQ6 235 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 GPR61Q9BZJ8 451 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF696Q9H7X3 374 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 PATZ1Q9HBE1 687 aaKnown RBP7.72□□□□□ -1.17
HDAC3-212ENST00000492407 NUP50Q9UKX7 468 aa7.72□□□□□ -1.17
HDAC3-212ENST00000492407 IGKV1D-43A0A0B4J1Z2 117 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 FAM220BPB1ANY3 271 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 CLDN34H7C241 214 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 FXYD1O00168 92 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 SLC22A2O15244 555 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 SHOXO15266 292 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 ALX3O95076 343 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 NGFP01138 241 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF12P17014 697 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 PRTN3P24158 256 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 LAP3P28838 519 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 SLC6A9P48067 706 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 RGS6P49758 472 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 GNG2P59768 71 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 CTXN1P60606 82 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms