RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TCEAL3Q969E4 200 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 CHCHD2Q9Y6H1 151 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-220ENST00000492280 EP300Q09472 2414 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-220ENST00000492280 M0R233 179 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 RAB3DO95716 219 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 LDOC1O95751 146 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-220ENST00000492280 UMODP07911 640 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 CSF1P09603 554 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 PGA4P0DJD7 388 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 PGA3P0DJD8 388 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 ACHEP22303 614 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 HSD11B1P28845 292 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 CLDN17P56750 224 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 PCOLCEQ15113 449 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 RAET1LQ5VY80 246 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 SLC36A1Q7Z2H8 476 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 CDH24Q86UP0 819 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 ELMOD2Q8IZ81 293 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 LRRC18Q8N456 261 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 OR5L2Q8NGL0 311 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 OR6M1Q8NGM8 313 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 MRI1Q9BV20 369 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 DUSP23Q9BVJ7 150 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 PILRBQ9UKJ0 227 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 TMEM265A0A087WTH1 108 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 ZNHIT1O43257 154 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 PRAF2O60831 178 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 QDPRP09417 244 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 LAP3P28838 519 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 PHYHD1Q5SRE7 291 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 MRPL14Q6P1L8 145 aaKnown RBP11.04□□□□□ -0.64
HMGN1-220ENST00000492280 KLHL24Q6TFL4 600 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 PAQR4Q8N4S7 273 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-220ENST00000492280 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-220ENST00000492280 LIN37Q96GY3 246 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-220ENST00000492280 SORCS2Q96PQ0 1159 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 MRPL13Q9BYD1 178 aaKnown RBP11.04□□□□□ -0.64
HMGN1-220ENST00000492280 BANF2Q9H503 90 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 SDHAF3Q9NRP4 125 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 B3GALT5Q9Y2C3 310 aa11.04□□□□□ -0.64
HMGN1-220ENST00000492280 DMXL1Q9Y485 3027 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 A0A0G2JMM0 328 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 A0A1W2PPB8 328 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 A0A1W2PRS3 328 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 KIR3DP1A8MWS1 328 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 SULT2B1O00204 365 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF208O43345 1280 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 WDPCPO95876 746 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF121P58317 390 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZP4Q12836 540 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 TAF13Q15543 124 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 SGCAQ16586 387 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 TOR2AQ5JU69 321 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 PLXDC2Q6UX71 529 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 DNM1P46Q6ZS02 220 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 FAM57BQ71RH2 274 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 FAM109AQ8N4B1 249 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 TMEM104Q8NE00 496 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 OR8B12Q8NGG6 310 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 MRGPRX4Q96LA9 322 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF385AQ96PM9 386 aaKnown RBP11.03□□□□□ -0.64
HMGN1-220ENST00000492280 SLX1AQ9BQ83 275 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-220ENST00000492280 C1orf198Q9H425 327 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 GPR84Q9NQS5 396 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF275Q9NSD4 429 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-220ENST00000492280 RHBDD3Q9Y3P4 386 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 MED13Q9UHV7 2174 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 RPS10-NUDT3A0A1W2PQS6 291 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 HSPB2A8KAH6 182 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF250P15622 560 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF43P17038 809 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 FAUP35544 74 aaKnown RBP11.03□□□□□ -0.64
HMGN1-220ENST00000492280 HSPB2Q16082 182 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 AWAT2Q6E213 333 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF813Q6ZN06 617 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF101Q8IZC7 436 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 SLC22A8Q8TCC7 542 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF837Q96EG3 531 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-220ENST00000492280 GUCD1Q96NT3 240 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 SLC6A7Q99884 636 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 TRAF4Q9BUZ4 470 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF160Q9HCG1 818 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 NBEAQ8NFP9 2946 aa11.03□□□□□ -0.64
HMGN1-220ENST00000492280 OR2M5A3KFT3 312 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 IGHG1P01857 330 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 VSIG8P0DPA2 414 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 FSTP19883 344 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 BDKRB2P30411 391 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 OR3A4PP47883 348 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 P2RX3P56373 397 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 GPR85P60893 370 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 SORDQ00796 357 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 OPCMLQ14982 345 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 FJX1Q86VR8 437 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 NAXEQ8NCW5 288 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 OR2AK2Q8NG84 335 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms