RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 OR5AS1Q8N127 324 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 ZNF511Q8NB15 262 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 PTP4A1Q93096 173 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 APOBEC3DQ96AK3 386 aaPredicted RBP20.94■□□□□ 0.94
UPF3A-209ENST00000492270 HAVCR1Q96D42 359 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 COG8Q96MW5 612 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 HCAR1Q9BXC0 346 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 MED20Q9H944 212 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 CMC2Q9NRP2 79 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 KCNG2Q9UJ96 466 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 ZDHHC8Q9ULC8 765 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 FAM183AA6NL82 134 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 RIIAD1A6NNX1 92 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 F5H5K5 113 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 J3QW42 95 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 HOXB6P17509 224 aaKnown RBP20.93■□□□□ 0.94
UPF3A-209ENST00000492270 SLC25A1P53007 311 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 CDH15P55291 814 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 PRSS12P56730 875 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 CDK5R2Q13319 367 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 ZMAT1Q5H9K5 638 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 ELMOD3Q96FG2 381 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 C1orf159Q96HA4 380 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 DNAJB9Q9UBS3 223 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 CDC42EP3Q9UKI2 254 aa20.93■□□□□ 0.94
UPF3A-209ENST00000492270 FAM157AC9JC47 383 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 TIPRLO75663 272 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 IFNGP01579 166 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 CD55P08174 381 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 RAC2P15153 192 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 ANOS1P23352 680 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 POU1F1P28069 291 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 GRK5P34947 590 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 TNFAIP6P98066 277 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-209ENST00000492270 HFEQ30201 348 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 OR2T2Q6IF00 324 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 FBXW12Q6X9E4 464 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 COLCA1Q6ZS62 124 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 LINC01356Q8N9X3 169 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 OR2Z1Q8NG97 314 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 OR5L1Q8NGL2 311 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 OR6K6Q8NGW6 343 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 DIRC2Q96SL1 478 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 C1QTNF5Q9BXJ0 243 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 EGLN1Q9GZT9 426 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 YY1AP1Q9H869 796 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 NTN4Q9HB63 628 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 DCAF16Q9NXF7 216 aa20.92■□□□□ 0.94
UPF3A-209ENST00000492270 CLDN25C9JDP6 229 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 SPARCP09486 303 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 ZNF3P17036 446 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 FMO3P31513 532 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 LMO4P61968 165 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 ECH1Q13011 328 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 FAM120AOSQ5T036 256 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 LINC01590Q5TEZ4 76 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 ACSM5Q6NUN0 579 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 DCXRQ7Z4W1 244 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 CCL17Q92583 94 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 BEX2Q9BXY8 128 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 SHARPINQ9H0F6 387 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 WIPI2Q9Y4P8 454 aa20.91■□□□□ 0.94
UPF3A-209ENST00000492270 ENTPD1P49961 510 aa20.9■□□□□ 0.94
UPF3A-209ENST00000492270 GINS1Q14691 196 aa20.9■□□□□ 0.94
UPF3A-209ENST00000492270 OTULINQ96BN8 352 aa20.9■□□□□ 0.94
UPF3A-209ENST00000492270 LCATP04180 440 aa20.89■□□□□ 0.93
UPF3A-209ENST00000492270 OSMP13725 252 aa20.89■□□□□ 0.93
UPF3A-209ENST00000492270 SLC27A4Q6P1M0 643 aa20.89■□□□□ 0.93
UPF3A-209ENST00000492270 BHLHE23Q8NDY6 225 aa20.89■□□□□ 0.93
UPF3A-209ENST00000492270 ITLN1Q8WWA0 313 aa20.89■□□□□ 0.93
UPF3A-209ENST00000492270 LPAR2Q9HBW0 351 aa20.89■□□□□ 0.93
UPF3A-209ENST00000492270 DDX28Q9NUL7 540 aaKnown RBP20.89■□□□□ 0.93
UPF3A-209ENST00000492270 M0R135 149 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 ZNF593O00488 134 aaPredicted RBP20.88■□□□□ 0.93
UPF3A-209ENST00000492270 FAM157CP0CG43 387 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 ANXA8P13928 327 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 RASSF2P50749 326 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 TPTEP56180 551 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 PCK2Q16822 640 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 CR1LQ2VPA4 569 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 ATG16L2Q8NAA4 619 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 OR10AD1Q8NGE0 317 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 UTP4Q969X6 686 aaKnown RBP20.88■□□□□ 0.93
UPF3A-209ENST00000492270 SLAMF6Q96DU3 332 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 ZNF799Q96GE5 643 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 ZNF556Q9HAH1 456 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 LPAR3Q9UBY5 353 aa20.88■□□□□ 0.93
UPF3A-209ENST00000492270 C5orf63A6NC05 138 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 H0YL77 283 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 ATP5HO75947 161 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 OTX1P32242 354 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-209ENST00000492270 GK2Q14410 553 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-209ENST00000492270 SNAI3Q3KNW1 292 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 TMEM236Q5W0B7 351 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 SHQ1Q6PI26 577 aaKnown RBP20.87■□□□□ 0.93
UPF3A-209ENST00000492270 SPATC1Q76KD6 591 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 ZNF771Q7L3S4 317 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-209ENST00000492270 OR8G5Q8NG78 346 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 ST7LQ8TDW4 575 aa20.87■□□□□ 0.93
UPF3A-209ENST00000492270 OR2V2Q96R30 315 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms