RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	FUZ	Q9BT04	418 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	C1QTNF5	Q9BXJ0	243 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	GORASP2	Q9H8Y8	452 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	SPAG4	Q9NPE6	437 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	TMEM100	Q9NV29	134 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	B9D1	Q9UPM9	204 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	LHFPL6	Q9Y693	200 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	TRBV4-1	A0A0J9YWV2	114 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	IDH3B	O43837	385 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	REN	P00797	406 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	SLC6A6	P31641	620 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	GATA4	P43694	442 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	CENPA	P49450	140 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	ERF	P50548	548 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	PSME3	P61289	254 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	GNB2	P62879	340 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	PAX2	Q02962	417 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	BAMBI	Q13145	260 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	C9orf139	Q6ZV77	190 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	NLRC3	Q7RTR2	1065 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	OR52E2	Q8NGJ4	325 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	RAB40A	Q8WXH6	277 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	SLC25A28	Q96A46	364 aa		15.03	■□□□□ -0
GGA1-223	ENST00000491295	NEIL1	Q96FI4	390 aa	Predicted RBP	15.03	■□□□□ -0
GGA1-223	ENST00000491295	ERMAP	Q96PL5	475 aa	Predicted RBP	15.03	■□□□□ -0
GGA1-223	ENST00000491295	MS4A7	Q9GZW8	240 aa	Predicted RBP	15.03	■□□□□ -0
GGA1-223	ENST00000491295	IGLV1-36	A0A0B4J1U3	117 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	POM121C	A8CG34	1229 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	IRF2	P14316	349 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	RPS2	P15880	293 aa	Known RBP	15.02	■□□□□ -0
GGA1-223	ENST00000491295	PRDX6	P30041	224 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	CD80	P33681	288 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	IFNGR2	P38484	337 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	MDH1	P40925	334 aa	Known RBP	15.02	■□□□□ -0
GGA1-223	ENST00000491295	MALL	Q13021	153 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	SEC23B	Q15437	767 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	KRTAP27-1	Q3LI81	207 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	ZBTB46	Q86UZ6	589 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	JAZF1	Q86VZ6	243 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	KLB	Q86Z14	1044 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	OR6V1	Q8N148	313 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	SLC26A10	Q8NG04	563 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	OR10AD1	Q8NGE0	317 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	OR2AJ1	Q8NGZ0	328 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	UPRT	Q96BW1	309 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	TSSK2	Q96PF2	358 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	CDADC1	Q9BWV3	514 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	ZNF696	Q9H7X3	374 aa		15.02	■□□□□ -0
GGA1-223	ENST00000491295	SRA1	Q9HD15	236 aa	Known RBP	15.02	■□□□□ -0
GGA1-223	ENST00000491295	NOP16	Q9Y3C1	178 aa	Known RBP	15.02	■□□□□ -0
GGA1-223	ENST00000491295	KIR2DS1	A0A191URI9	304 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	DNAJC9-AS1	A6NH13	148 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	DCTN6	O00399	190 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	MLNR	O43193	412 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	GADD45G	O95257	159 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	PPP1R3D	O95685	299 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	RNASE1	P07998	156 aa	Known RBP	15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	FPR3	P25089	353 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	BPIFB3	P59826	476 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	IL13RA1	P78552	427 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	RSPO1	Q2MKA7	263 aa	Predicted RBP	15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	ZNF404	Q494X3	552 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	PRR31	Q5SQ13	230 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	OTP	Q5XKR4	325 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	LEG1	Q6P5S2	330 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	OR8B3	Q8NGG8	313 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	OR52J3	Q8NH60	311 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	ZNF420	Q8TAQ5	688 aa	Predicted RBP	15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	FANK1	Q8TC84	345 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	PYURF	Q96I23	114 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	OR8B2	Q96RD0	313 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	PITX2	Q99697	317 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	TMEM246	Q9BRR3	403 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	SLC22A4	Q9H015	551 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	MED4	Q9NPJ6	270 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	KCNG2	Q9UJ96	466 aa		15.01	□□□□□ -0.01
GGA1-223	ENST00000491295	IGHV2-70D	A0A0C4DH43	119 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	CYB5R3	P00387	301 aa	Predicted RBP	15	□□□□□ -0.01
GGA1-223	ENST00000491295	ACSM4	P0C7M7	580 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	NOS3	P29474	1203 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	HNRNPA0	Q13151	305 aa	Known RBP	15	□□□□□ -0.01
GGA1-223	ENST00000491295	MEP1B	Q16820	701 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	SLC18B1	Q6NT16	456 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	DCDC5	Q6ZRR9	648 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	MOGAT3	Q86VF5	341 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	BCL6B	Q8N143	479 aa	Predicted RBP	15	□□□□□ -0.01
GGA1-223	ENST00000491295	PARP8	Q8N3A8	854 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295		Q8TCH9	128 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	MCUR1	Q96AQ8	359 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	DACT3	Q96B18	629 aa	Predicted RBP	15	□□□□□ -0.01
GGA1-223	ENST00000491295	NMNAT3	Q96T66	252 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	ATF6B	Q99941	703 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	OR52D1	Q9H346	318 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	ADA2	Q9NZK5	511 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	CYB5R1	Q9UHQ9	305 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295	PCDHGB1	Q9Y5G3	927 aa		15	□□□□□ -0.01
GGA1-223	ENST00000491295		F5H5K5	113 aa		14.99	□□□□□ -0.01
GGA1-223	ENST00000491295		F5H5P2	479 aa		14.99	□□□□□ -0.01
GGA1-223	ENST00000491295		H0YL77	283 aa		14.99	□□□□□ -0.01
GGA1-223	ENST00000491295	TMPRSS2	O15393	492 aa		14.99	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms