RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TNFRSF1AP19438 455 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 ZFP36P26651 326 aaKnown RBP15.17■□□□□ 0.02
HMGN1-219ENST00000491183 PYCR1P32322 319 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 SLC36A3Q495N2 470 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 SHQ1Q6PI26 577 aaKnown RBP15.17■□□□□ 0.02
HMGN1-219ENST00000491183 ATG16L2Q8NAA4 619 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 CYB561A3Q8NBI2 242 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 OR8G5Q8NG78 346 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 PITX2Q99697 317 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 CDADC1Q9BWV3 514 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 C1QTNF5Q9BXJ0 243 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 WDR76Q9H967 626 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 VNN3Q9NY84 501 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 PPP1R3CQ9UQK1 317 aa15.17■□□□□ 0.02
HMGN1-219ENST00000491183 FBN3Q75N90 2809 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 A0A0G2JMP0 313 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 A0A0X1KG70 313 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 F5H5K5 113 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 SURF4O15260 269 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 HLA-DQA2P01906 255 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 LCN2P80188 198 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 TRIM25Q14258 630 aaKnown RBP15.16■□□□□ 0.02
HMGN1-219ENST00000491183 DCAF12L2Q5VW00 463 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 LCN8Q6JVE9 175 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 RASSF6Q6ZTQ3 369 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 LRRC28Q86X40 367 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-219ENST00000491183 ARHGAP24Q8N264 748 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 LINC00471Q8N535 108 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 OR4M2Q8NGB6 313 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 OR10S1Q8NGN2 331 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 OR2AJ1Q8NGZ0 328 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 OR13G1Q8NGZ3 307 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 MAP6Q96JE9 813 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 SLC30A2Q9BRI3 323 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 MAGIXQ9H6Y5 334 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 GCM1Q9NP62 436 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 OPN4Q9UHM6 478 aa15.16■□□□□ 0.02
HMGN1-219ENST00000491183 IQCF6A8MYZ5 107 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 TMEM178BH3BS89 294 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 J3QLI3 93 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 MLNRO43193 412 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 CCNB2O95067 398 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 PSKH1P11801 424 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 PRSS12P56730 875 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 ZMYND11Q15326 602 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 TMEM155Q4W5P6 130 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 RPL13AP3Q6NVV1 102 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 SLC27A4Q6P1M0 643 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 LYPD4Q6UWN0 246 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 DHFR2Q86XF0 187 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 SEMA6DQ8NFY4 1073 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 OR10AD1Q8NGE0 317 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 OR52L1Q8NGH7 329 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 ST7LQ8TDW4 575 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 MEGF10Q96KG7 1140 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 ZNF582Q96NG8 517 aaPredicted RBP15.15■□□□□ 0.02
HMGN1-219ENST00000491183 ATF6BQ99941 703 aa15.15■□□□□ 0.02
HMGN1-219ENST00000491183 PATZ1Q9HBE1 687 aaKnown RBP15.15■□□□□ 0.02
HMGN1-219ENST00000491183 A0A0A6YYJ9 748 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 A0A1B0GWJ7 208 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 TVP23AA6NH52 213 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 FAM107AO95990 144 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 ADRA2CP18825 462 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 EPHA1P21709 976 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 RPS27P42677 84 aaKnown RBP15.14■□□□□ 0.01
HMGN1-219ENST00000491183 SLC6A9P48067 706 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 MMP16P51512 607 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 SEC61A1P61619 476 aaKnown RBP15.14■□□□□ 0.01
HMGN1-219ENST00000491183 BTG1P62324 171 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 TRAP1Q12931 704 aaKnown RBP15.14■□□□□ 0.01
HMGN1-219ENST00000491183 ECH1Q13011 328 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 OR2T5Q6IEZ7 315 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 C1QL2Q7Z5L3 287 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 AQP11Q8NBQ7 271 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 SLC37A3Q8NCC5 494 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 BHLHE23Q8NDY6 225 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 OR51L1Q8NGJ5 315 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 OR2T29Q8NH02 315 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 OR4Q3Q8NH05 313 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF420Q8TAQ5 688 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-219ENST00000491183 TSSK6Q9BXA6 273 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 MUC13Q9H3R2 512 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 C7orf69Q9H7B7 122 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 MMP26Q9NRE1 261 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 KCNG2Q9UJ96 466 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 PCDHB10Q9UN67 800 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 U3KQV3 271 aa15.14■□□□□ 0.01
HMGN1-219ENST00000491183 IGHV3-64DA0A0J9YX35 117 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 F5H5P2 479 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 TRAPPC2LH3BP13 241 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 FOXH1O75593 365 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 RGS9O75916 674 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-219ENST00000491183 LCATP04180 440 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF823P16415 610 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 CALB2P22676 271 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 ANOS1P23352 680 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 GATA3P23771 443 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 PMELP40967 661 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 GK2Q14410 553 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-219ENST00000491183 MICAQ29983 383 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms