RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ADIRFQ15847 76 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 BEX5Q5H9J7 111 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 BCORP1Q8N888 145 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 COL11A1P12107 1806 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 CLEC3BP05452 202 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 MAOBP27338 520 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 APEX1P27695 318 aaKnown RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 GALNT16Q8N428 558 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 PLPP7Q8NBV4 271 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OR10X1Q8NGY0 326 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 Q96M85 177 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OR51B6Q9H340 312 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OCIAD1Q9NX40 245 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF629Q9UEG4 869 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 CRYM-AS1A6NIL9 109 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 YY2O15391 372 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 M6PRP20645 277 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF718Q3SXZ3 478 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 CPEB2Q7Z5Q1 589 aaKnown RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 RPL3LQ92901 407 aaKnown RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 TMEM18Q96B42 140 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 NEIL1Q96FI4 390 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OR5M11Q96RB7 305 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 AK3Q9UIJ7 227 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 QSER1Q2KHR3 1735 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 LOC107986453A0A1B0GWG9 222 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 SHBQ15464 509 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 MPPED2Q15777 294 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 PRAMEF6Q5VXH4 476 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 RPUSD3Q6P087 351 aaKnown RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF561Q8N587 486 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 LKAAEAR1Q8TD35 194 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 C2orf50Q96LR7 162 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 MAGEB4O15481 346 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 RNPS1Q15287 305 aaKnown RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 PNPLA1Q8N8W4 532 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OR51F2Q8NH61 342 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ST7LQ8TDW4 575 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 CDCP1Q9H5V8 836 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 FAM96BQ9Y3D0 163 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 SELENOFO60613 162 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CRYABP02511 175 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 TPOP07202 933 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 OR10J4P0C629 311 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 LAIR1Q6GTX8 287 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ZDHHC23Q8IYP9 409 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 DYNC2LI1Q8TCX1 351 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 GALMQ96C23 342 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ELF4Q99607 663 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SLCO1B1Q9Y6L6 691 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CCDC163A0A0D9SF12 145 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF816-ZNF321PA0A0X1KG74 233 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 KLKB1P03952 638 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 MGST1P10620 155 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 NME2P22392 152 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 EIF3IQ13347 325 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 LYG2Q86SG7 212 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SPPL3Q8TCT6 385 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SEC22AQ96IW7 307 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ZIC5Q96T25 663 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 TRAPPC4Q9Y296 219 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 COA3Q9Y2R0 106 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SPTBP11277 2137 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 STMND1H3BQB6 276 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 IL2RAP01589 272 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 GP1BAP07359 652 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 LIPAP38571 399 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 DSCR4P56555 118 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 PPP1CAP62136 330 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CDK5R1Q15078 307 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF239Q16600 458 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 TMEM128Q5BJH2 165 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 PRAMEF20Q5VT98 475 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 OR4Q3Q8NH05 313 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 OR52N5Q8NH56 324 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 MRPS24Q96EL2 167 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 PHF7Q9BWX1 381 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF724A8MTY0 619 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SRFP11831 508 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 HIST1H1CP16403 213 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ERVFC1P60507 584 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 RNF4P78317 190 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CDK5Q00535 292 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 MRPL58Q14197 206 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CLINT1Q14677 625 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SPRED3Q2MJR0 410 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 TMEM81Q6P7N7 255 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 OR2AK2Q8NG84 335 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 QDPRP09417 244 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 THNSL2Q86YJ6 484 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 PFN4Q8NHR9 129 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 RASD2Q96D21 266 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 PHYHIPLQ96FC7 376 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 REEP6Q96HR9 211 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 POMT1Q9Y6A1 747 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 HSD17B6O14756 317 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CHEK1O14757 476 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 LIPCP11150 499 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms