RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 INSIG2Q9Y5U4 225 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 DOCK11Q5JSL3 2073 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 IQCF6A8MYZ5 107 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SURF4O15260 269 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 WNT2P09544 360 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ACSM4P0C7M7 580 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SLC6A6P31641 620 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 GGT2P36268 569 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MDH2P40926 338 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PMELP40967 661 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PRSS12P56730 875 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SMIM11AP58511 58 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ACTG1P63261 375 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 DNM1P34Q6PK57 102 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 LINC00346Q8IVM7 164 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR5L1Q8NGL2 311 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR13G1Q8NGZ3 307 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 JMJD8Q96S16 334 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CDRT15Q96T59 188 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 RBM4Q9BWF3 364 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 FAM107BQ9H098 131 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 FN3KQ9H479 309 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 IL1RAPQ9NPH3 570 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 RPRD1BQ9NQG5 326 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MRPL22Q9NWU5 206 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CYB5R1Q9UHQ9 305 aa16.28■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MEGF8Q7Z7M0 2845 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CEACAM18A8MTB9 384 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ARPC2O15144 300 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNF205O95201 554 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CYB5R3P00387 301 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ANOS1P23352 680 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 RRM2P31350 389 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNF362Q5T0B9 420 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SLC27A4Q6P1M0 643 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PGBD2Q6P3X8 592 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 JAZF1Q86VZ6 243 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PGAM4Q8N0Y7 254 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 BPIFB2Q8N4F0 458 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SDR9C7Q8NEX9 313 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNRF4Q8WWF5 429 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 POP5Q969H6 163 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNF582Q96NG8 517 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 IFT27Q9BW83 186 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PLA2G12AQ9BZM1 189 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ARL8BQ9NVJ2 186 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNF69Q9UC07 566 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 POLR1DQ9Y2S0 133 aa16.27■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TRRAPQ9Y4A5 3859 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 IGHV3-64DA0A0J9YX35 117 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 F5H5P2 479 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR10H3O60404 316 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 GMNNO75496 209 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 RENP00797 406 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 FABP3P05413 133 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SELEP16581 610 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CD80P33681 288 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 HMGA2P52926 109 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 UBA52P62987 128 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 PAX8Q06710 450 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 TSPAN31Q12999 210 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 GK2Q14410 553 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SAMD4BQ5PRF9 694 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ZNF620Q6ZNG0 422 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 BCL6BQ8N143 479 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 BHLHE23Q8NDY6 225 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR10S1Q8NGN2 331 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 GCDHQ92947 438 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 DACT3Q96B18 629 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MAP6Q96JE9 813 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 NSMCE2Q96MF7 247 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 AUP1Q9Y679 476 aa16.26■□□□□ 0.19
TNFRSF1B-202ENST00000489921 IFNL4K9M1U5 179 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ATP8B1O43520 1251 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 IDH3BO43837 385 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 HLA-DPB1P04440 258 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 PSKH1P11801 424 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MAB21L1Q13394 359 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ZNF181Q2M3W8 571 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 FAM201AQ5SY85 155 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SLC35F1Q5T1Q4 408 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MOGAT3Q86VF5 341 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MUC20Q8N307 709 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SIGLECL1Q8N7X8 197 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 GNPDA2Q8TDQ7 276 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 C1orf147Q96MC9 270 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ZNF48Q96MX3 618 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 TMEM246Q9BRR3 403 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 EGLN3Q9H6Z9 239 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 NUP50Q9UKX7 468 aa16.25■□□□□ 0.19
TNFRSF1B-202ENST00000489921 F5H5K5 113 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 BHLHE40O14503 412 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 FSTL3O95633 263 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 FPR2P25090 351 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SRP9P49458 86 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 TRAP1Q12931 704 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ZNF770Q6IQ21 691 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 DOK3Q7L591 496 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 PIGWQ7Z7B1 504 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms