RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SHFQ7M4L6 423 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 MAPK1IP1LQ8NDC0 245 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 DIRC2Q96SL1 478 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 PKP2Q99959 881 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 PURGQ9UJV8 347 aaKnown RBP14.81□□□□□ -0.04
MDC1-206ENST00000489540 MTORP42345 2549 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 A0A096LNT2 108 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 H3BNX3 289 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 HPXP02790 462 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 HEXAP06865 529 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 IGFBP5P24593 272 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 TAF13Q15543 124 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 KLHL12Q53G59 568 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 FAM209AQ5JX71 171 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 FBXW12Q6X9E4 464 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 CXXC5Q7LFL8 322 aaKnown RBP14.8□□□□□ -0.04
MDC1-206ENST00000489540 ERI1Q8IV48 349 aaKnown RBP14.8□□□□□ -0.04
MDC1-206ENST00000489540 TIGD4Q8IY51 512 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 OR10S1Q8NGN2 331 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 SLAMF6Q96DU3 332 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 RBM4BQ9BQ04 359 aaKnown RBP14.8□□□□□ -0.04
MDC1-206ENST00000489540 POFUT1Q9H488 388 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 DECR2Q9NUI1 292 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 ZDHHC8Q9ULC8 765 aa14.8□□□□□ -0.04
MDC1-206ENST00000489540 SAC3D1A6NKF1 404 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 ZAR1LA6NP61 321 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 M0R135 149 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 LCATP04180 440 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 ADH4P08319 380 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 MAGEB1P43366 347 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 SLC15A1P46059 708 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 CCL8P80075 99 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 PPP2R2BQ00005 443 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 EIF2B1Q14232 305 aaKnown RBP14.79□□□□□ -0.04
MDC1-206ENST00000489540 TMEM255AQ5JRV8 349 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 SLX4IPQ5VYV7 408 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 RHOUQ7L0Q8 258 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 DPY19L4Q7Z388 723 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 OR6N2Q8NGY6 317 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 ST7LQ8TDW4 575 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 ZMYND19Q96E35 227 aaPredicted RBP14.79□□□□□ -0.04
MDC1-206ENST00000489540 ZNF799Q96GE5 643 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 CIB1Q99828 191 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 COPS4Q9BT78 406 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 CHODLQ9H9P2 273 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 CENPMQ9NSP4 180 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 PTTG3PQ9NZH4 202 aa14.79□□□□□ -0.04
MDC1-206ENST00000489540 TMEFF2Q9UIK5 374 aaPredicted RBP14.79□□□□□ -0.04
MDC1-206ENST00000489540 ZNF878C9JN71 531 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 TPD52L2O43399 206 aaKnown RBP14.78□□□□□ -0.04
MDC1-206ENST00000489540 SPRY3O43610 288 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 PSKH1P11801 424 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 ACHEP22303 614 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 COL8A2P25067 703 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 OTX1P32242 354 aaPredicted RBP14.78□□□□□ -0.04
MDC1-206ENST00000489540 TMEM33P57088 247 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 RPS7P62081 194 aaKnown RBP14.78□□□□□ -0.04
MDC1-206ENST00000489540 GRB2P62993 217 aaKnown RBP14.78□□□□□ -0.04
MDC1-206ENST00000489540 MALLQ13021 153 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 RIN1Q13671 783 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 DRAM2Q6UX65 266 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 ZNF454Q8N9F8 522 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 KCNJ15Q99712 375 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 BPESC1Q9GZL8 116 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 EGLN1Q9GZT9 426 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 S100A14Q9HCY8 104 aa14.78□□□□□ -0.04
MDC1-206ENST00000489540 LYNX1G3V0Z9 82 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 TLX2O43763 284 aaPredicted RBP14.77□□□□□ -0.04
MDC1-206ENST00000489540 NCR1O76036 304 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 IGHV1-46P01743 117 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 LYNX1P0DP58 116 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 SELEP16581 610 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 SLC2A5P22732 501 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 SLC6A9P48067 706 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 EFNB1P98172 346 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 CDK5R2Q13319 367 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 GGTLC2Q14390 218 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 TSTQ16762 297 aaKnown RBP14.77□□□□□ -0.04
MDC1-206ENST00000489540 C12orf73Q69YU5 71 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 NAA40Q86UY6 237 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 BBS1Q8NFJ9 593 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 RNF133Q8WVZ7 376 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 GTF3AQ92664 365 aaKnown RBP14.77□□□□□ -0.04
MDC1-206ENST00000489540 TEAD3Q99594 435 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 ABHD6Q9BV23 337 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 TOR3AQ9H497 397 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 SAP30LQ9HAJ7 183 aa14.77□□□□□ -0.04
MDC1-206ENST00000489540 H2AFY2Q9P0M6 372 aaPredicted RBP14.77□□□□□ -0.04
MDC1-206ENST00000489540 ZSCAN5BA6NJL1 495 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 PRKYO43930 277 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 APOC1P02654 83 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 CD55P08174 381 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 TNFSF4P23510 183 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 EPHA2P29317 976 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 CRYBB2P43320 205 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 APOFQ13790 326 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 HLXQ14774 488 aaPredicted RBP14.76□□□□□ -0.05
MDC1-206ENST00000489540 TMEM249Q2WGJ8 235 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 LCN1P1Q5VSP4 162 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 Q71RC1 249 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms