RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TAS2R41P59536 307 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 MPPED2Q15777 294 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 CYP51A1Q16850 503 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 CCDC92Q53HC0 331 aaPredicted RBP13.32□□□□□ -0.28
USP48-210ENST00000489108 PRAMEF6Q5VXH4 476 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
USP48-210ENST00000489108 GALNT4Q8N4A0 578 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 BOLLQ8N9W6 283 aaKnown RBP13.32□□□□□ -0.28
USP48-210ENST00000489108 LRRC75AQ8NAA5 344 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 Q8TCH9 128 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 WDR76Q9H967 626 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
USP48-210ENST00000489108 COL7A1Q02388 2944 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 A0A1B0GWJ7 208 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 ELOVL7A1L3X0 281 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 A6NIZ1 184 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 SHOX2O60902 331 aaPredicted RBP13.31□□□□□ -0.28
USP48-210ENST00000489108 FCN3O75636 299 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 TNFRSF1BP20333 461 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 GABRA5P31644 462 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 RGS6P49758 472 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 PRSS12P56730 875 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 RAP1BP61224 184 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 RAP1AP62834 184 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 PIN1Q13526 163 aaPredicted RBP13.31□□□□□ -0.28
USP48-210ENST00000489108 SELPLGQ14242 412 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 TNFAIP8L3Q5GJ75 292 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 INTS11Q5TA45 600 aaKnown RBP13.31□□□□□ -0.28
USP48-210ENST00000489108 C11orf87Q6NUJ2 197 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 EPGNQ6UW88 154 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 BTN2A1Q7KYR7 527 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 VMO1Q7Z5L0 202 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 LRRC8CQ8TDW0 803 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 ERGIC1Q969X5 290 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 PPA2Q9H2U2 334 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 TOR3AQ9H497 397 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 ZNRD1Q9P1U0 126 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
USP48-210ENST00000489108 DNAH3Q8TD57 4116 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 J3QW42 95 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 LGALS8O00214 317 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 OR10H3O60404 316 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 FBP1P09467 338 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 CRYBA2P53672 197 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 RAD23AP54725 363 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 KCNJ8Q15842 424 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 C1orf122Q6ZSJ8 110 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 CELF2-AS1Q8N7Q2 184 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 OR51A7Q8NH64 312 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 CFHR4Q92496 578 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 APOBEC3DQ96AK3 386 aaPredicted RBP13.3□□□□□ -0.28
USP48-210ENST00000489108 ECSITQ9BQ95 431 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 CNTD2Q9H8S5 307 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 RNF7Q9UBF6 113 aa13.3□□□□□ -0.28
USP48-210ENST00000489108 RER1O15258 196 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 OR5F1O95221 314 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 IFI30P13284 250 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 CD200P41217 278 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 EFNB2P52799 333 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 MTPNP58546 118 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 PRB3Q04118 309 aaPredicted RBP13.29□□□□□ -0.28
USP48-210ENST00000489108 AQP6Q13520 282 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 OR8B8Q15620 311 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 AGKQ53H12 422 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 MICU2Q8IYU8 434 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 LYG1Q8N1E2 194 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 PPP1R35Q8TAP8 253 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
USP48-210ENST00000489108 CAB39Q9Y376 341 aaPredicted RBP13.29□□□□□ -0.28
USP48-210ENST00000489108 TRAV27A0A087WT01 109 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 RNASEK-C17orf49H0YIS7 233 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 DVL1O14640 695 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 XPNPEP2O43895 674 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 GYPAP02724 150 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 POU4F2Q12837 409 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 FHL1Q13642 323 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 CDONQ4KMG0 1287 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 BEND6Q5SZJ8 279 aaPredicted RBP13.28□□□□□ -0.28
USP48-210ENST00000489108 NPRL2Q8WTW4 380 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 PHF21AQ96BD5 680 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 HCAR1Q9BXC0 346 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 KPTNQ9Y664 436 aa13.28□□□□□ -0.28
USP48-210ENST00000489108 TENM3Q9P273 2699 aa13.27□□□□□ -0.28
USP48-210ENST00000489108 TRAV38-1A0A0B4J264 116 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 A0A1B0GVI7 797 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 TMEM120BA0PK00 339 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 NDUFA2O43678 99 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 MPIG6BO95866 241 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 ECDO95905 644 aaPredicted RBP13.27□□□□□ -0.29
USP48-210ENST00000489108 CTLA4P16410 223 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 KIR2DS4P43632 304 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 NSUN5P1Q3KNT7 163 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 FGFRL1Q8N441 504 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 RASSF5Q8WWW0 418 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 ZNF583Q96ND8 569 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 POLR2J2Q9GZM3 115 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms