RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 OR2T4Q8NH00 348 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 PITX2Q99697 317 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 ATF6BQ99941 703 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 EGLN3Q9H6Z9 239 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 REEP1Q9H902 201 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 TBC1D23Q9NUY8 699 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 IL20Q9NYY1 176 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 BAIAP2Q9UQB8 552 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 A0A0G2JMP0 313 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 A0A0X1KG70 313 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 BHLHE40O14503 412 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 TCF21O43680 179 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 DEAF1O75398 565 aaPredicted RBP11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 ZNF823P16415 610 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 SLC35F1Q5T1Q4 408 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 OR2T5Q6IEZ7 315 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 CORO6Q6QEF8 472 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 AQP11Q8NBQ7 271 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 PROKR2Q8NFJ6 384 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 OR4M2Q8NGB6 313 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 OR4C15Q8NGM1 316 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 OR2T29Q8NH02 315 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 ST7LQ8TDW4 575 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 FN3KQ9H479 309 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 PTTG3PQ9NZH4 202 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 CYB5R1Q9UHQ9 305 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 POMPQ9Y244 141 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 SAMHD1Q9Y3Z3 626 aaKnown RBP11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 NPTNQ9Y639 398 aa11.69□□□□□ -0.54
SPTLC1-207ENST00000488921 IFNL4K9M1U5 179 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 RAP2AP10114 183 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 SELEP16581 610 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 HOXB6P17509 224 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 GATA3P23771 443 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 MS4A2Q01362 244 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 MALLQ13021 153 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 MICAQ29983 383 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 ZNF770Q6IQ21 691 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 CFAP77Q6ZQR2 320 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 Q6ZR03 302 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 LINC00346Q8IVM7 164 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 SPICQ8N5J4 248 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 ZNF283Q8N7M2 679 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 OR8G5Q8NG78 346 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 OR13G1Q8NGZ3 307 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 ZNF582Q96NG8 517 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 OR2V2Q96R30 315 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 HCAR1Q9BXC0 346 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 C1QTNF5Q9BXJ0 243 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 DGCR6LQ9BY27 220 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 TMEM106BQ9NUM4 274 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 PPP1R3CQ9UQK1 317 aa11.68□□□□□ -0.54
SPTLC1-207ENST00000488921 AQP12BA6NM10 295 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 IQCF6A8MYZ5 107 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 F5H5K5 113 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 J3QLI3 93 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 ACOT8O14734 319 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 GASTP01350 101 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 IFNGP01579 166 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 IGHV2-70P01814 119 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 GGT2P36268 569 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 SRP9P49458 86 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 TPTEP56180 551 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 HLXQ14774 488 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 KRTAP27-1Q3LI81 207 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 KRTAP24-1Q3LI83 254 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 OR2T2Q6IF00 324 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 FAHD2BQ6P2I3 314 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 COLCA1Q6ZS62 124 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 SPATA24Q86W54 205 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 AQP12AQ8IXF9 295 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 OR5AS1Q8N127 324 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 LNX2Q8N448 690 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 KLHL36Q8N4N3 616 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 ATG16L2Q8NAA4 619 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 CYB561A3Q8NBI2 242 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 OR2T33Q8NG76 320 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 ITLN1Q8WWA0 313 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 SPTSSAQ969W0 71 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 FAHD2AQ96GK7 314 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 REPIN1Q9BWE0 567 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 TSSK6Q9BXA6 273 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 PLA2G12AQ9BZM1 189 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 METTL17Q9H7H0 456 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 G6PC2Q9NQR9 355 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 MRPL22Q9NWU5 206 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 UBAP1Q9NZ09 502 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 PCDHB10Q9UN67 800 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 U3KQV3 271 aa11.67□□□□□ -0.54
SPTLC1-207ENST00000488921 M0R135 149 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 PLPP2O43688 288 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 FOXH1O75593 365 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 ACSM4P0C7M7 580 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 ZNF3P17036 446 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 PYCR1P32322 319 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 ERFP50548 548 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 BLVRAP53004 296 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 BTG1P62324 171 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 PPP1R8Q12972 351 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 TMEM155Q4W5P6 130 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms