RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ROM1Q03395 351 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 HGFACQ04756 655 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF829Q3KNS6 432 aaPredicted RBP10.67□□□□□ -0.7
TRAIP-209ENST00000488860 C3orf36Q3SXR2 165 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 BEX5Q5H9J7 111 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 PRSS48Q7RTY5 328 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 NR1H4Q96RI1 486 aaPredicted RBP10.67□□□□□ -0.7
TRAIP-209ENST00000488860 DOK1Q99704 481 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF649Q9BS31 505 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 MND1Q9BWT6 205 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 ISG20L2Q9H9L3 353 aaKnown RBP10.67□□□□□ -0.7
TRAIP-209ENST00000488860 POU2F3Q9UKI9 436 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 CAB39Q9Y376 341 aaPredicted RBP10.67□□□□□ -0.7
TRAIP-209ENST00000488860 DOPEY2Q9Y3R5 2298 aa10.67□□□□□ -0.7
TRAIP-209ENST00000488860 LOC110117498-PIK3R3F6TDL0 507 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 SIAH2O43255 324 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 SULT1C4O75897 302 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 MT-ND5P03915 603 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 LCATP04180 440 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 CD3EP07766 207 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 RPSAP08865 295 aaKnown RBP10.66□□□□□ -0.7
TRAIP-209ENST00000488860 TACSTD2P09758 323 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF121P58317 390 aaPredicted RBP10.66□□□□□ -0.7
TRAIP-209ENST00000488860 MFGE8Q08431 387 aaPredicted RBP10.66□□□□□ -0.7
TRAIP-209ENST00000488860 MED22Q15528 200 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 GFOD2Q3B7J2 385 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 NCMAPQ5T1S8 102 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 LIPNQ5VXI9 398 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF773Q6PK81 442 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 DEGS2Q6QHC5 323 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 SLC22A25Q6T423 547 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 DRAM2Q6UX65 266 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 RFPL4BQ6ZWI9 263 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 FAM57BQ71RH2 274 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 NAA40Q86UY6 237 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 SYS1Q8N2H4 156 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 SVOPQ8N4V2 548 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 KBTBD8Q8NFY9 601 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 OR52N1Q8NH53 320 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 ABHD4Q8TB40 342 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 GATAD2BQ8WXI9 593 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 PGAM5Q96HS1 289 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 C4orf45Q96LM5 186 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 CDCA4Q9BXL8 241 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF696Q9H7X3 374 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 NIPAL2Q9H841 368 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 SLC24A3Q9HC58 644 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 EIF3KQ9UBQ5 218 aaKnown RBP10.66□□□□□ -0.7
TRAIP-209ENST00000488860 ATP23Q9Y6H3 246 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 R4GMQ9 66 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 RTTNQ86VV8 2226 aa10.66□□□□□ -0.7
TRAIP-209ENST00000488860 ICE1Q9Y2F5 2266 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
TRAIP-209ENST00000488860 TMEM269A0A1B0GVZ9 245 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 TMEM129A0AVI4 362 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 DEFB108AA8MXU0 73 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 SMPD2O60906 423 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 APOC1P02654 83 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 ATP6V1B1P15313 513 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 COL8A1P27658 744 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 WNT5AP41221 380 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 GBX2P52951 348 aaPredicted RBP10.65□□□□□ -0.7
TRAIP-209ENST00000488860 NR1H2P55055 460 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 WNT4P56705 351 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 SNTB2Q13425 540 aaKnown RBP10.65□□□□□ -0.7
TRAIP-209ENST00000488860 IRF3Q14653 427 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 KRTAP27-1Q3LI81 207 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 SPATA46Q5T0L3 261 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF684Q5T5D7 378 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 BCL2L15Q5TBC7 163 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 SP5Q6BEB4 398 aaPredicted RBP10.65□□□□□ -0.7
TRAIP-209ENST00000488860 VHLLQ6RSH7 139 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 ARL9Q6T311 187 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 RHOUQ7L0Q8 258 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 COMMD2Q86X83 199 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 KLBQ86Z14 1044 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 NANOGP1Q8N7R0 232 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 IL17RDQ8NFM7 739 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 TSPAN14Q8NG11 270 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 PELI1Q96FA3 418 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 SIGLEC11Q96RL6 698 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 DCLRE1CQ96SD1 692 aaKnown RBP10.65□□□□□ -0.7
TRAIP-209ENST00000488860 PTTG3PQ9NZH4 202 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 RNF115Q9Y4L5 304 aa10.65□□□□□ -0.7
TRAIP-209ENST00000488860 UTP20O75691 2785 aaKnown RBP10.65□□□□□ -0.71
TRAIP-209ENST00000488860 CADP27708 2225 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 PNMA8CA0A1B0GUJ8 204 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 MRPS14O60783 128 aaKnown RBP10.64□□□□□ -0.71
TRAIP-209ENST00000488860 LCKP06239 509 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 HSMCR30P0CW71 290 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 ZNF35P13682 527 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 ANOS1P23352 680 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 OTX1P32242 354 aaPredicted RBP10.64□□□□□ -0.71
TRAIP-209ENST00000488860 RGS6P49758 472 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 ERVS71-1P61550 626 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 TBCEQ15813 527 aaPredicted RBP10.64□□□□□ -0.71
TRAIP-209ENST00000488860 NEDD8Q15843 81 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 ODF4Q2M2E3 257 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 RSPO1Q2MKA7 263 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms