RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SMN1Q16637 294 aaKnown RBP9.49□□□□□ -0.89
UBE4B-210ENST00000488228 MST1LQ2TV78 715 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 C6orf52Q5T4I8 152 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 LRRN1Q6UXK5 716 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 IZUMO2Q6UXV1 221 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 SSX6Q7RTT6 188 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 OR10H4Q8NGA5 316 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 RHOXF1Q8NHV9 184 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 CNIH3Q8TBE1 160 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 THEM6Q8WUY1 208 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 GTF3AQ92664 365 aaKnown RBP9.49□□□□□ -0.89
UBE4B-210ENST00000488228 NINJ1Q92982 152 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 RFKQ969G6 155 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 SPTSSAQ969W0 71 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 RNFT2Q96EX2 444 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 PERPQ96FX8 193 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF799Q96GE5 643 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 CACNG6Q9BXT2 260 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 OR2J1Q9GZK6 312 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 YIPF3Q9GZM5 350 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 PTTG3PQ9NZH4 202 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 MAGEB4O15481 346 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 MPZL2O60487 215 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 H2BFMP0C1H6 154 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 DBTP11182 482 aaKnown RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 ALOX5APP20292 161 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 HSD11B1P28845 292 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 OTX1P32242 354 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 MTNR1AP48039 350 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 CX3CR1P49238 355 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 TPTEP56180 551 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 KLF3P57682 345 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 CXCR4P61073 352 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 POU4F2Q12837 409 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 HLXQ14774 488 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 EFNB3Q15768 340 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 SWI5Q1ZZU3 235 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 DEFB113Q30KQ7 82 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 SNAI3Q3KNW1 292 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 ALKBH6Q3KRA9 238 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 SLC25A30Q5SVS4 291 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 MEDAGQ5VYS4 303 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 TTC23Q5W5X9 447 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 NAA40Q86UY6 237 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF283Q8N7M2 679 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 PIGTQ969N2 578 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 APOBEC3DQ96AK3 386 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 MARS2Q96GW9 593 aaKnown RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 DCLRE1CQ96SD1 692 aaKnown RBP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 DOK1Q99704 481 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 KCNJ15Q99712 375 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 VCX3BQ9H321 246 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 CXorf56Q9H5V9 222 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 ELOVL3Q9HB03 270 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 AMBNQ9NP70 447 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 DYNLRB1Q9NP97 96 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 TBCCD1Q9NVR7 557 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 CLN6Q9NWW5 311 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 SLCO1C1Q9NYB5 712 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 HAO2Q9NYQ3 351 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 DUSP13Q9UII6 198 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.48□□□□□ -0.89
UBE4B-210ENST00000488228 STARD10Q9Y365 291 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 LRP12Q9Y561 859 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 N6AMT1Q9Y5N5 214 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 CELSR1Q9NYQ6 3014 aa9.48□□□□□ -0.89
UBE4B-210ENST00000488228 TMEM129A0AVI4 362 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 B9A039 149 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF670-ZNF695F2Z2N8 137 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 H0YAE9 185 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 OVOL3O00110 214 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 NDUFS7O75251 213 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 LCATP04180 440 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ANXA2P07355 339 aaKnown RBP9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF250P15622 560 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ATP6V1E1P36543 226 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ALDH3B1P43353 468 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 PTH2RP49190 550 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 RGS6P49758 472 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF121P58317 390 aaPredicted RBP9.47□□□□□ -0.89
UBE4B-210ENST00000488228 PSMA6P60900 246 aaKnown RBP9.47□□□□□ -0.89
UBE4B-210ENST00000488228 GRB2P62993 217 aaKnown RBP9.47□□□□□ -0.89
UBE4B-210ENST00000488228 IL18R1Q13478 541 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ARL9Q6T311 187 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF322Q6U7Q0 402 aaPredicted RBP9.47□□□□□ -0.89
UBE4B-210ENST00000488228 PLEKHG7Q6ZR37 379 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 USP51Q70EK9 711 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 KRT77Q7Z794 578 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 C8orf59Q8N0T1 100 aaPredicted RBP9.47□□□□□ -0.89
UBE4B-210ENST00000488228 SETD9Q8NE22 299 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 OR2AE1Q8NHA4 323 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 SYNPRQ8TBG9 265 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 KLF14Q8TD94 323 aaPredicted RBP9.47□□□□□ -0.89
UBE4B-210ENST00000488228 TFAP2CQ92754 450 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 MBD6Q96DN6 1003 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 LGALS12Q96DT0 336 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 RHNO1Q9BSD3 238 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 C1QTNF5Q9BXJ0 243 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 BEX4Q9NWD9 120 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms