RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SPICQ8N5J4 248 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 ATG16L2Q8NAA4 619 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 OR10AD1Q8NGE0 317 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 OR52E2Q8NGJ4 325 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 NANPQ8TBE9 248 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 C1QTNF5Q9BXJ0 243 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 EGLN3Q9H6Z9 239 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 PATZ1Q9HBE1 687 aaKnown RBP16.26■□□□□ 0.19
CD55-209ENST00000488171 PNRC2Q9NPJ4 139 aaKnown RBP16.26■□□□□ 0.19
CD55-209ENST00000488171 MRPL22Q9NWU5 206 aaKnown RBP16.26■□□□□ 0.19
CD55-209ENST00000488171 NDE1Q9NXR1 346 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 CYB5R1Q9UHQ9 305 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 LYVE1Q9Y5Y7 322 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 IQCF6A8MYZ5 107 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 H0YL77 283 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 TMEM178BH3BS89 294 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 MLNRO43193 412 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 FOXH1O75593 365 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 DCTN3O75935 186 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 ACSM4P0C7M7 580 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 ATP6V1B2P21281 511 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 HILS1P60008 231 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 SEC61A1P61619 476 aaKnown RBP16.26■□□□□ 0.19
CD55-209ENST00000488171 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.26■□□□□ 0.19
CD55-209ENST00000488171 SLC36A3Q495N2 470 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 KLHL36Q8N4N3 616 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 OR9Q2Q8NGE9 314 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 OR13G1Q8NGZ3 307 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 MEGF10Q96KG7 1140 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 ZNF582Q96NG8 517 aaPredicted RBP16.26■□□□□ 0.19
CD55-209ENST00000488171 DDOQ99489 341 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 SLC30A2Q9BRI3 323 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 BTBD10Q9BSF8 475 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 WDR76Q9H967 626 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 MMP26Q9NRE1 261 aa16.26■□□□□ 0.19
CD55-209ENST00000488171 POLR3KQ9Y2Y1 108 aaPredicted RBP16.26■□□□□ 0.19
CD55-209ENST00000488171 F5H0A9 414 aaPredicted RBP16.25■□□□□ 0.19
CD55-209ENST00000488171 BHLHE40O14503 412 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 KRT36O76013 467 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 SLC6A9P48067 706 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 MXRA7P84157 204 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 CLEC12AQ5QGZ9 265 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 ZNF770Q6IQ21 691 aaPredicted RBP16.25■□□□□ 0.19
CD55-209ENST00000488171 SLC27A4Q6P1M0 643 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 CYP2R1Q6VVX0 501 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 NAA40Q86UY6 237 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 BHLHE23Q8NDY6 225 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 DEFB108BQ8NET1 73 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 OR4C15Q8NGM1 316 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 PITX2Q99697 317 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 ATF6BQ99941 703 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 ACTR3BQ9P1U1 418 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 CDH10Q9Y6N8 788 aa16.25■□□□□ 0.19
CD55-209ENST00000488171 A0A1B0GWJ7 208 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 F5H5K5 113 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 TRAPPC2LH3BP13 241 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 HLA-DQA2P01906 255 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 MDH2P40926 338 aaKnown RBP16.24■□□□□ 0.19
CD55-209ENST00000488171 MAGEA2P43356 314 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 PRSS12P56730 875 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 TRAP1Q12931 704 aaKnown RBP16.24■□□□□ 0.19
CD55-209ENST00000488171 ECH1Q13011 328 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 OR2AJ1Q8NGZ0 328 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 ZNF420Q8TAQ5 688 aaPredicted RBP16.24■□□□□ 0.19
CD55-209ENST00000488171 ZNRF4Q8WWF5 429 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 MAP6Q96JE9 813 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 SLC6A7Q99884 636 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 CDADC1Q9BWV3 514 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 PLA2G12AQ9BZM1 189 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 TRIM15Q9C019 465 aa16.24■□□□□ 0.19
CD55-209ENST00000488171 TCRBV5S2A0A599 114 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 A8MXK9 166 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 IFNL4K9M1U5 179 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 TNFRSF11BO00300 401 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 PYCR1P32322 319 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 SRP9P49458 86 aaKnown RBP16.23■□□□□ 0.19
CD55-209ENST00000488171 GK2Q14410 553 aaPredicted RBP16.23■□□□□ 0.19
CD55-209ENST00000488171 ZNF362Q5T0B9 420 aaPredicted RBP16.23■□□□□ 0.19
CD55-209ENST00000488171 FITM2Q8N6M3 262 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 CYB561A3Q8NBI2 242 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 OR52L1Q8NGH7 329 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 OR8D4Q8NGM9 314 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 OR10S1Q8NGN2 331 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 HCAR1Q9BXC0 346 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 IL20Q9NYY1 176 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 KCNG2Q9UJ96 466 aa16.23■□□□□ 0.19
CD55-209ENST00000488171 WNK2Q9Y3S1 2297 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 IGHV3-64DA0A0J9YX35 117 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 CEACAM18A8MTB9 384 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 F5H5P2 479 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 CYB5R3P00387 301 aaPredicted RBP16.22■□□□□ 0.19
CD55-209ENST00000488171 GASTP01350 101 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 PSKH1P11801 424 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 RPS27P42677 84 aaKnown RBP16.22■□□□□ 0.19
CD55-209ENST00000488171 RPL13AP3Q6NVV1 102 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 RASSF6Q6ZTQ3 369 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 MUC20Q8N307 709 aaPredicted RBP16.22■□□□□ 0.19
CD55-209ENST00000488171 FAM216AQ8WUB2 273 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 DVL3Q92997 716 aaPredicted RBP16.22■□□□□ 0.19
CD55-209ENST00000488171 SUCNR1Q9BXA5 334 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms