RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 TIAF1O95411 115 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 RLN2P04090 185 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 RPA2P15927 270 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 MPGP29372 298 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 CALCRP30988 508 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 MMP16P51512 607 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 FOXK1P85037 733 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 INPP5JQ15735 1006 aaPredicted RBP15.98■□□□□ 0.15
VIM-206ENST00000487938 KLHL24Q6TFL4 600 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 NKAIN3Q8N8D7 197 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 OR10S1Q8NGN2 331 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 SEC61A2Q9H9S3 476 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 SERINC1Q9NRX5 453 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 KLRF1Q9NZS2 232 aa15.98■□□□□ 0.15
VIM-206ENST00000487938 TMEM200CA6NKL6 621 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 HLA-AP01891 365 aaKnown RBP15.97■□□□□ 0.15
VIM-206ENST00000487938 GIMD1P0DJR0 217 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 GNB3P16520 340 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 NAGAP17050 411 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 ZP3P21754 424 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 CD34P28906 385 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 TAF13Q15543 124 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 CLVS2Q5SYC1 327 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 DEGS2Q6QHC5 323 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 OR1M1Q8NGA1 313 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 OR6K3Q8NGY3 331 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 FOXRED1Q96CU9 486 aaPredicted RBP15.97■□□□□ 0.15
VIM-206ENST00000487938 SPACA5Q96QH8 159 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 EDEM2Q9BV94 578 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 SEMA5BQ9P283 1151 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 A0A0A6YYH2 397 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 OR14I1A6ND48 311 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 OR5H14A6NHG9 310 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 A6NJ64 397 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 DISC1C4P0D8 188 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 HOXD4P09016 255 aaPredicted RBP15.97■□□□□ 0.15
VIM-206ENST00000487938 FOSL2P15408 326 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 CDAP32320 146 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 NUP62P37198 522 aaPredicted RBP15.97■□□□□ 0.15
VIM-206ENST00000487938 RIPPLY1Q0D2K3 151 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 RNASE10Q5GAN6 216 aaKnown RBP15.97■□□□□ 0.15
VIM-206ENST00000487938 FAM69BQ5VUD6 431 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 OR13C9Q8NGT0 318 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 OR6S1Q8NH40 331 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 OR1S1Q8NH92 325 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 PTX4Q96A99 478 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 ZBTB8AQ96BR9 441 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 PDCD10Q9BUL8 212 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 UBE2ZQ9H832 354 aaPredicted RBP15.97■□□□□ 0.15
VIM-206ENST00000487938 CYB5R1Q9UHQ9 305 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 SESN1Q9Y6P5 492 aa15.97■□□□□ 0.15
VIM-206ENST00000487938 CPED1A4D0V7 1026 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 VSIG8P0DPA2 414 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 RAB6AP20340 208 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 BEX5Q5H9J7 111 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 CARD17Q5XLA6 110 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 RHBDD2Q6NTF9 364 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 ZNF574Q6ZN55 896 aaPredicted RBP15.96■□□□□ 0.15
VIM-206ENST00000487938 CFAP77Q6ZQR2 320 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 SLC51BQ86UW2 128 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 PDZD9Q8IXQ8 264 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 OR5M9Q8NGP3 310 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 SOX7Q9BT81 388 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 TGIF2Q9GZN2 237 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 ZNF768Q9H5H4 540 aaKnown RBP15.96■□□□□ 0.15
VIM-206ENST00000487938 PPP4R1LQ9P1A2 415 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 B3GAT1Q9P2W7 334 aa15.96■□□□□ 0.15
VIM-206ENST00000487938 PHF3Q92576 2039 aaKnown RBP15.96■□□□□ 0.15
VIM-206ENST00000487938 SLC2A1P11166 492 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 CLDN6P56747 220 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 MYBPHQ13203 477 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 MFAP5Q13361 173 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 STPG2Q8N412 459 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 OR5M8Q8NGP6 311 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 OR51E1Q8TCB6 317 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 MRGPRFQ96AM1 343 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 SELENOIQ9C0D9 397 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 MS4A7Q9GZW8 240 aaPredicted RBP15.96■□□□□ 0.14
VIM-206ENST00000487938 CHRDQ9H2X0 955 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 MED9Q9NWA0 146 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 SLC5A6Q9Y289 635 aa15.96■□□□□ 0.14
VIM-206ENST00000487938 WDR87Q6ZQQ6 2873 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 A0A1W2PNR3 127 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 FAM25EA8MYX2 175 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 ZNF208O43345 1280 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 HSD11B1P28845 292 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 PRKXP51817 358 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 BTN1A1Q13410 526 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 ATXN7L3Q14CW9 347 aaPredicted RBP15.95■□□□□ 0.14
VIM-206ENST00000487938 NKAIN1Q4KMZ8 207 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 WDR74Q6RFH5 385 aaPredicted RBP15.95■□□□□ 0.14
VIM-206ENST00000487938 RHOUQ7L0Q8 258 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 ANGPTL5Q86XS5 388 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 SPERTQ8NA61 448 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 ST8SIA4Q92187 359 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 OR6C1Q96RD1 312 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 CST11Q9H112 138 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 PPA2Q9H2U2 334 aa15.95■□□□□ 0.14
VIM-206ENST00000487938 MYOZ1Q9NP98 299 aaPredicted RBP15.95■□□□□ 0.14
VIM-206ENST00000487938 ALKBH4Q9NXW9 302 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms