RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 HCAR1Q9BXC0 346 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 GCM1Q9NP62 436 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 RPRD1BQ9NQG5 326 aaKnown RBP10.49□□□□□ -0.73
SREBF1-215ENST00000487401 TMEM100Q9NV29 134 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.49□□□□□ -0.736e-8■■■■□ 24.1
SREBF1-215ENST00000487401 LRRC30A6NM36 301 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 F5H5K5 113 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 TMEM178BH3BS89 294 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 ARPC2O15144 300 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 SEMG1P04279 462 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 RRM2P31350 389 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 RBMXP38159 391 aaKnown RBP10.48□□□□□ -0.73
SREBF1-215ENST00000487401 SLC6A9P48067 706 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 MXRA7P84157 204 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 COX10Q12887 443 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 MALLQ13021 153 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 ESCO2Q56NI9 601 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 C16orf89Q6UX73 402 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 SLC26A10Q8NG04 563 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 OR10AD1Q8NGE0 317 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 POP5Q969H6 163 aaKnown RBP10.48□□□□□ -0.73
SREBF1-215ENST00000487401 CCT8L2Q96SF2 557 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 MRI1Q9BV20 369 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 RASSF4Q9H2L5 321 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 WDR76Q9H967 626 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 NTN4Q9HB63 628 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 IL1RAPQ9NPH3 570 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 MMP26Q9NRE1 261 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 NDE1Q9NXR1 346 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 OR5V1Q9UGF6 321 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 CD300AQ9UGN4 299 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 TAGLN3Q9UI15 199 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 AUP1Q9Y679 476 aa10.48□□□□□ -0.73
SREBF1-215ENST00000487401 H0YL77 283 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 KRT36O76013 467 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 LCATP04180 440 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 IRF2P14316 349 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF823P16415 610 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 CPT2P23786 658 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 CFPP27918 469 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 GSSP48637 474 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 MMP16P51512 607 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 TSPAN31Q12999 210 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF154Q13106 437 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 ARMCX4Q5H9R4 360 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 SLC35F1Q5T1Q4 408 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 SLC18B1Q6NT16 456 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 ZBTB46Q86UZ6 589 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 MOGAT3Q86VF5 341 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 LINC00346Q8IVM7 164 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 ZDHHC21Q8IVQ6 265 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 C3orf56Q8N813 242 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 BHLHE23Q8NDY6 225 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 DEFB108BQ8NET1 73 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 SDR9C7Q8NEX9 313 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 OR52E2Q8NGJ4 325 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 C22orf15Q8WYQ4 148 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 SIGLEC11Q96RL6 698 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 SLC30A2Q9BRI3 323 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 C1QTNF5Q9BXJ0 243 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 DDX28Q9NUL7 540 aaKnown RBP10.47□□□□□ -0.73
SREBF1-215ENST00000487401 ARL2BPQ9Y2Y0 163 aa10.47□□□□□ -0.73
SREBF1-215ENST00000487401 YLPM1P49750 1951 aaKnown RBP10.46□□□□□ -0.73
SREBF1-215ENST00000487401 NBEAL1Q6ZS30 2694 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 IGHV3-64DA0A0J9YX35 117 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 TMEM89A2RUT3 159 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 OR6C68A6NDL8 312 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 CEACAM18A8MTB9 384 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 IQCF6A8MYZ5 107 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 F5H5P2 479 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 TRAPPC2LH3BP13 241 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 TNFRSF11BO00300 401 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF205O95201 554 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 FAM107AO95990 144 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 CYB5R3P00387 301 aaPredicted RBP10.46□□□□□ -0.73
SREBF1-215ENST00000487401 ACSM4P0C7M7 580 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF12P17014 697 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 MNAT1P51948 309 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 TPTEP56180 551 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.46□□□□□ -0.73
SREBF1-215ENST00000487401 TRAP1Q12931 704 aaKnown RBP10.46□□□□□ -0.73
SREBF1-215ENST00000487401 RSPO1Q2MKA7 263 aaPredicted RBP10.46□□□□□ -0.73
SREBF1-215ENST00000487401 SPATS1Q496A3 300 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 CLEC12AQ5QGZ9 265 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 PGBD2Q6P3X8 592 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF620Q6ZNG0 422 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 CFAP77Q6ZQR2 320 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 COLCA1Q6ZS62 124 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 C10orf67Q8IYJ2 551 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 DEFB107AQ8IZN7 70 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 C1orf87Q8N0U7 546 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 PROKR2Q8NFJ6 384 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 OR52L1Q8NGH7 329 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF420Q8TAQ5 688 aaPredicted RBP10.46□□□□□ -0.73
SREBF1-215ENST00000487401 SPRYD4Q8WW59 207 aaPredicted RBP10.46□□□□□ -0.73
SREBF1-215ENST00000487401 SPTSSAQ969W0 71 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 ATF6BQ99941 703 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 FN3KQ9H479 309 aa10.46□□□□□ -0.73
SREBF1-215ENST00000487401 ARL8BQ9NVJ2 186 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms