RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ZNF540Q8NDQ6 660 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 OR6N2Q8NGY6 317 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 SPTSSAQ969W0 71 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 SLAMF6Q96DU3 332 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 CIB1Q99828 191 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 PKP2Q99959 881 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 C1QTNF5Q9BXJ0 243 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 ZANQ9Y493 2812 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 CR1P17927 2039 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 M0R135 149 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 KITLGP21583 273 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 USF1P22415 310 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-207ENST00000486572 GIFP27352 417 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 TPTEP56180 551 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 CCL8P80075 99 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 MRPS11P82912 194 aaKnown RBP15.52■□□□□ 0.08
COL1A1-207ENST00000486572 PPP2R2BQ00005 443 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 KLHL12Q53G59 568 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 SLC35D3Q5M8T2 416 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 FBXW12Q6X9E4 464 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 CXXC5Q7LFL8 322 aaKnown RBP15.52■□□□□ 0.08
COL1A1-207ENST00000486572 DPY19L4Q7Z388 723 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 TIGD4Q8IY51 512 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 ST7LQ8TDW4 575 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 RDH5Q92781 318 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 HAVCR1Q96D42 359 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 CMBLQ96DG6 245 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 ZMYND19Q96E35 227 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-207ENST00000486572 ZNF799Q96GE5 643 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 COPS4Q9BT78 406 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 OSBPL10Q9BXB5 764 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 BPESC1Q9GZL8 116 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 PTTG3PQ9NZH4 202 aa15.52■□□□□ 0.08
COL1A1-207ENST00000486572 TMEFF2Q9UIK5 374 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-207ENST00000486572 PURGQ9UJV8 347 aaKnown RBP15.52■□□□□ 0.08
COL1A1-207ENST00000486572 ZSCAN5BA6NJL1 495 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 ZAR1LA6NP61 321 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 ZNF878C9JN71 531 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 LYNX1G3V0Z9 82 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 IGHV1-46P01743 117 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 LYNX1P0DP58 116 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 RAC2P15153 192 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 SLC2A5P22732 501 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 EPHA2P29317 976 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 OTX1P32242 354 aaPredicted RBP15.51■□□□□ 0.07
COL1A1-207ENST00000486572 RPS7P62081 194 aaKnown RBP15.51■□□□□ 0.07
COL1A1-207ENST00000486572 EIF2B1Q14232 305 aaKnown RBP15.51■□□□□ 0.07
COL1A1-207ENST00000486572 GGTLC2Q14390 218 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 FAM209AQ5JX71 171 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 SLX4IPQ5VYV7 408 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 Q71RC1 249 aaPredicted RBP15.51■□□□□ 0.07
COL1A1-207ENST00000486572 SHFQ7M4L6 423 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 BBS1Q8NFJ9 593 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 RBM4BQ9BQ04 359 aaKnown RBP15.51■□□□□ 0.07
COL1A1-207ENST00000486572 CHODLQ9H9P2 273 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 CENPMQ9NSP4 180 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 DECR2Q9NUI1 292 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 ZDHHC8Q9ULC8 765 aa15.51■□□□□ 0.07
COL1A1-207ENST00000486572 CHD3Q12873 2000 aaKnown RBP15.5■□□□□ 0.07
COL1A1-207ENST00000486572 TPD52L2O43399 206 aaKnown RBP15.5■□□□□ 0.07
COL1A1-207ENST00000486572 SPRY3O43610 288 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 PRKYO43930 277 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 LCATP04180 440 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 ADH4P08319 380 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 ACHEP22303 614 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 SLC6A9P48067 706 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 KRTAP1-1Q07627 177 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 RIN1Q13671 783 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 HLXQ14774 488 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-207ENST00000486572 TAF13Q15543 124 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 TSTQ16762 297 aaKnown RBP15.5■□□□□ 0.07
COL1A1-207ENST00000486572 C12orf73Q69YU5 71 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 DRAM2Q6UX65 266 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 DIRC2Q96SL1 478 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 ABHD6Q9BV23 337 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 GABARAPL3Q9BY60 117 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 SAP30LQ9HAJ7 183 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 MSL2Q9HCI7 577 aa15.5■□□□□ 0.07
COL1A1-207ENST00000486572 SELENOFO60613 162 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 COL8A2P25067 703 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 SLC15A1P46059 708 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 GRB2P62993 217 aaKnown RBP15.49■□□□□ 0.07
COL1A1-207ENST00000486572 MALLQ13021 153 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 APOFQ13790 326 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 TMEM249Q2WGJ8 235 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 SPATC1Q76KD6 591 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 NAA40Q86UY6 237 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 RNF133Q8WVZ7 376 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 YIPF5Q969M3 257 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 KCNJ15Q99712 375 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 TLN2Q9Y4G6 2542 aa15.49■□□□□ 0.07
COL1A1-207ENST00000486572 NSD1Q96L73 2696 aaPredicted RBP15.49■□□□□ 0.07
COL1A1-207ENST00000486572 IGHV4-61A0A0C4DH41 118 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 M0R129 80 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 RP2O75695 350 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 NAA10P41227 235 aaPredicted RBP15.48■□□□□ 0.07
COL1A1-207ENST00000486572 LCN1P1Q5VSP4 162 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 RHOUQ7L0Q8 258 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 ZNF454Q8N9F8 522 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 OTOSQ8NHW6 89 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms