RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 TACC2O95359 2948 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 ROS1P08922 2347 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 LOC100130705A0A1B0GUX0 176 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 NGFP01138 241 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 LCATP04180 440 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 H2BFMP0C1H6 154 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 ACSM4P0C7M7 580 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 RAC2P15153 192 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 SELEP16581 610 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 HTR1FP30939 366 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 SLC6A9P48067 706 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 SNRPGP62308 76 aaKnown RBP13.21□□□□□ -0.29
HDHD3-203ENST00000485934 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 KRTAP27-1Q3LI81 207 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 TTC23Q5W5X9 447 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 DEGS2Q6QHC5 323 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 COLCA1Q6ZS62 124 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 BBS1Q8NFJ9 593 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 ST7LQ8TDW4 575 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 HAVCR1Q96D42 359 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 DIRC2Q96SL1 478 aa13.21□□□□□ -0.29
HDHD3-203ENST00000485934 PNRC2Q9NPJ4 139 aaKnown RBP13.21□□□□□ -0.29
HDHD3-203ENST00000485934 SLC16A6O15403 523 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF254O75437 659 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 ADRA2AP08913 450 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 DBHP09172 617 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 ALOX5APP20292 161 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 OTX1P32242 354 aaPredicted RBP13.2□□□□□ -0.3
HDHD3-203ENST00000485934 RPS27P42677 84 aaKnown RBP13.2□□□□□ -0.3
HDHD3-203ENST00000485934 SLC34A1Q06495 639 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 DBPQ10586 325 aaPredicted RBP13.2□□□□□ -0.3
HDHD3-203ENST00000485934 LRRC36Q1X8D7 754 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 CLEC2AQ6UVW9 174 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 FBXW12Q6X9E4 464 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 RFPL4BQ6ZWI9 263 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 TGIF2LYQ8IUE0 185 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 GALNT4Q8N4A0 578 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF283Q8N7M2 679 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 OR52H1Q8NGJ2 320 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 SLC7A6Q92536 515 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 MROQ9BYG7 248 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 HEATR1Q9H583 2144 aaKnown RBP13.2□□□□□ -0.3
HDHD3-203ENST00000485934 OPA3Q9H6K4 179 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 FAM118AQ9NWS6 357 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 CLN6Q9NWW5 311 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 NKIRAS2Q9NYR9 191 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 ZDHHC8Q9ULC8 765 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 STARD10Q9Y365 291 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 PCDHGB1Q9Y5G3 927 aa13.2□□□□□ -0.3
HDHD3-203ENST00000485934 POLQO75417 2590 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 CASQ2O14958 399 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-203ENST00000485934 TIMM8AO60220 97 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-203ENST00000485934 SELENOFO60613 162 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 IGHV4-39P01824 125 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 CFL1P23528 166 aaKnown RBP13.19□□□□□ -0.3
HDHD3-203ENST00000485934 NAA10P41227 235 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-203ENST00000485934 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 OCLNQ16625 522 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 CLEC12BQ2HXU8 276 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 RSPO1Q2MKA7 263 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-203ENST00000485934 SPATA46Q5T0L3 261 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 KRT77Q7Z794 578 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 ITFG2Q969R8 447 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 CMBLQ96DG6 245 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 FZR1Q9UM11 496 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 CREBBPQ92793 2442 aa13.19□□□□□ -0.3
HDHD3-203ENST00000485934 DSCAMO60469 2012 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 AKAP6Q13023 2319 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 CCDC182A6NF36 153 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 ACOD1A6NK06 481 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 C17orf100A8MU93 164 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF670-ZNF695F2Z2N8 137 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 NDUFS8O00217 210 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 XRCC2O43543 280 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 SSX4O60224 188 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 KITLGP21583 273 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 TNFSF4P23510 183 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 DCTDP32321 178 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 OPRL1P41146 370 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 MTNR1AP48039 350 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF81P51508 661 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF771Q7L3S4 317 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-203ENST00000485934 LRP11Q86VZ4 500 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 DHRSXQ8N5I4 330 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 SETD9Q8NE22 299 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 OR10S1Q8NGN2 331 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF582Q96NG8 517 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-203ENST00000485934 MBOAT4Q96T53 435 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 EGLN1Q9GZT9 426 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 DECR2Q9NUI1 292 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 ZNF391Q9UJN7 358 aa13.18□□□□□ -0.3
HDHD3-203ENST00000485934 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
HDHD3-203ENST00000485934 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms