RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TBCCD1Q9NVR7 557 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 FAM118AQ9NWS6 357 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 LAMP5Q9UJQ1 280 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 KLHDC2Q9Y2U9 406 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 CSMD1Q96PZ7 3565 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 IGLV3-9A0A075B6K5 115 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 LOC100130705A0A1B0GUX0 176 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 CASQ2O14958 399 aaPredicted RBP10.15□□□□□ -0.78
HPS4-214ENST00000485842 SSX4O60224 188 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 LY6HO94772 140 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 APOL3O95236 402 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 H2BFMP0C1H6 154 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 SLC2A1P11166 492 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 SLC15A1P46059 708 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 EVX1P49640 407 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 GRB2P62993 217 aaKnown RBP10.15□□□□□ -0.78
HPS4-214ENST00000485842 SLC34A1Q06495 639 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 TESK1Q15569 626 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 KRTAP27-1Q3LI81 207 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 OGFRL1Q5TC84 451 aaPredicted RBP10.15□□□□□ -0.78
HPS4-214ENST00000485842 LRRN1Q6UXK5 716 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 NAA40Q86UY6 237 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 SLC35F2Q8IXU6 374 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 C1orf174Q8IYL3 243 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 ZCCHC24Q8N2G6 241 aaKnown RBP10.15□□□□□ -0.78
HPS4-214ENST00000485842 PACRGLQ8N7B6 248 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 WFDC11Q8NEX6 87 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 OR51G2Q8NGK0 314 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 OR5L1Q8NGL2 311 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 SNX33Q8WV41 574 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 RNF133Q8WVZ7 376 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 CYGBQ8WWM9 190 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 COG8Q96MW5 612 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 RDH12Q96NR8 316 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 KCNJ15Q99712 375 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 YIPF3Q9GZM5 350 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 RNPEPL1Q9HAU8 725 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 BARX1Q9HBU1 254 aaPredicted RBP10.15□□□□□ -0.78
HPS4-214ENST00000485842 C8orf4Q9NR00 106 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 AASSQ9UDR5 926 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 WARS2Q9UGM6 360 aaKnown RBP10.15□□□□□ -0.78
HPS4-214ENST00000485842 FBXO9Q9UK97 447 aaPredicted RBP10.15□□□□□ -0.78
HPS4-214ENST00000485842 N6AMT1Q9Y5N5 214 aa10.15□□□□□ -0.78
HPS4-214ENST00000485842 E9PQ18 207 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 H3BSA7 217 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 J3QW42 95 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 DLGAP1O14490 977 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 TIMM8AO60220 97 aaPredicted RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 ENTPD6O75354 484 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 ERCC1P07992 297 aaPredicted RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 NAT2P11245 290 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 HTR1FP30939 366 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 OTX1P32242 354 aaPredicted RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 CX3CR1P49238 355 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 SNRPGP62308 76 aaKnown RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 GGTLC2Q14390 218 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 HLXQ14774 488 aaPredicted RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 TMEM255AQ5JRV8 349 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 SHEQ5VZ18 495 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 MBNL2Q5VZF2 373 aaKnown RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 KRT77Q7Z794 578 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 ENTHD1Q8IYW4 607 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 TRUB1Q8WWH5 349 aaKnown RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 GTF3AQ92664 365 aaKnown RBP10.14□□□□□ -0.79
HPS4-214ENST00000485842 RFKQ969G6 155 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 Q96MF0 132 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 TBX5Q99593 518 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 C1QTNF5Q9BXJ0 243 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 VCXQ9H320 206 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 ADGRL4Q9HBW9 690 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 BRD7Q9NPI1 651 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 SLCO1C1Q9NYB5 712 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 GPR160Q9UJ42 338 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 COPS3Q9UNS2 423 aa10.14□□□□□ -0.79
HPS4-214ENST00000485842 OTOGQ6ZRI0 2925 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 PLSCR5A0PG75 271 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 ZNF670-ZNF695F2Z2N8 137 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 PSMD9O00233 223 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 TBX1O43435 398 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 IGHV3-13P01766 116 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 MT-ND5P03915 603 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 ANXA2P07355 339 aaKnown RBP10.13□□□□□ -0.79
HPS4-214ENST00000485842 SBK2P0C263 348 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 ALOX5APP20292 161 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 ANOS1P23352 680 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 ATP6V1E1P36543 226 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 OPRL1P41146 370 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 EFNA4P52798 201 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 PRSS12P56730 875 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 MALLQ13021 153 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 PSG7Q13046 419 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 CARTPTQ16568 116 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 MOGQ16653 247 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 SNAI3Q3KNW1 292 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 DRAM2Q6UX65 266 aa10.13□□□□□ -0.79
HPS4-214ENST00000485842 COLCA1Q6ZS62 124 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms