RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 NTN4Q9HB63 628 aa10.67□□□□□ -0.7
PTCD1-205ENST00000485746 ZNF275Q9NSD4 429 aaPredicted RBP10.67□□□□□ -0.7
PTCD1-205ENST00000485746 TVP23BQ9NYZ1 205 aa10.67□□□□□ -0.7
PTCD1-205ENST00000485746 MAP1AP78559 2803 aaPredicted RBP10.67□□□□□ -0.7
PTCD1-205ENST00000485746 LOC100289279A0A1B0GTE1 492 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 M0R135 149 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 GLCEO94923 617 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 IGHV1-46P01743 117 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 IGHV4-31P0DP07 118 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 RAC2P15153 192 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 SELEP16581 610 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 ZNF16P17020 682 aaPredicted RBP10.66□□□□□ -0.7
PTCD1-205ENST00000485746 KITLGP21583 273 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 DAPP51397 102 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 MMP15P51511 669 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 CRISP1P54107 249 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 CDK5Q00535 292 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 MVKQ03426 396 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 KRTAP1-1Q07627 177 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 RIN1Q13671 783 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 CCNIQ14094 377 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 EIF2B1Q14232 305 aaKnown RBP10.66□□□□□ -0.7
PTCD1-205ENST00000485746 TMEM236Q5W0B7 351 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 OR2T2Q6IF00 324 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 PLBD1Q6P4A8 553 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 SPATC1Q76KD6 591 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 SHFQ7M4L6 423 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 OR2Z1Q8NG97 314 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 LRTOMTQ8WZ04 291 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 CCL17Q92583 94 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 ZNF799Q96GE5 643 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 TIMD4Q96H15 378 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 MAP6Q96JE9 813 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 ZNF582Q96NG8 517 aaPredicted RBP10.66□□□□□ -0.7
PTCD1-205ENST00000485746 INTS14Q96SY0 518 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 PRRG3Q9BZD7 231 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 NMNAT2Q9BZQ4 307 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 KRT84Q9NSB2 600 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 TREM2Q9NZC2 230 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 KCNS2Q9ULS6 477 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 COMMD3-BMI1R4GMX3 469 aa10.66□□□□□ -0.7
PTCD1-205ENST00000485746 ZSCAN5BA6NJL1 495 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 CLDN25C9JDP6 229 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 SURF4O15260 269 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 TGFAP01135 160 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
PTCD1-205ENST00000485746 HSD11B1P28845 292 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 CRYBB2P43320 205 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 SLC15A1P46059 708 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 PRKXP51817 358 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 SLC3A1Q07837 685 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 TRIP10Q15642 601 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 FAM166AQ6J272 317 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 CXXC5Q7LFL8 322 aaKnown RBP10.65□□□□□ -0.7
PTCD1-205ENST00000485746 MRPL21Q7Z2W9 205 aaKnown RBP10.65□□□□□ -0.7
PTCD1-205ENST00000485746 PEG10Q86TG7 708 aaKnown RBP10.65□□□□□ -0.7
PTCD1-205ENST00000485746 NAA40Q86UY6 237 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 CPOQ8IVL8 374 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 C10orf67Q8IYJ2 551 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 ZNF283Q8N7M2 679 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 THEM6Q8WUY1 208 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 SLAMF6Q96DU3 332 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 ZMYND19Q96E35 227 aaPredicted RBP10.65□□□□□ -0.7
PTCD1-205ENST00000485746 C1QTNF5Q9BXJ0 243 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 SEMA6AQ9H2E6 1030 aa10.65□□□□□ -0.7
PTCD1-205ENST00000485746 H2AFY2Q9P0M6 372 aaPredicted RBP10.65□□□□□ -0.7
PTCD1-205ENST00000485746 PLCE1Q9P212 2302 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 TEP1Q99973 2627 aaKnown RBP10.64□□□□□ -0.71
PTCD1-205ENST00000485746 ZNF878C9JN71 531 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 LMX1BO60663 402 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 LILRA1O75019 489 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 TACSTD2P09758 323 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 TNFRSF1AP19438 455 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 ESRRGP62508 458 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 GRB2P62993 217 aaKnown RBP10.64□□□□□ -0.71
PTCD1-205ENST00000485746 CDK5R2Q13319 367 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 TMEM255AQ5JRV8 349 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 TEX30Q5JUR7 227 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 AVPI1Q5T686 147 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 FAHD1Q6P587 224 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 FBXW12Q6X9E4 464 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 PGAP1Q75T13 922 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 ASRGL1Q7L266 308 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 DPY19L4Q7Z388 723 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.64□□□□□ -0.71
PTCD1-205ENST00000485746 BHLHE23Q8NDY6 225 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 OR13G1Q8NGZ3 307 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 SPRYD4Q8WW59 207 aaPredicted RBP10.64□□□□□ -0.71
PTCD1-205ENST00000485746 PYDC1Q8WXC3 89 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 HPS1Q92902 700 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 RAB1CQ92928 201 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 DUS3LQ96G46 650 aaKnown RBP10.64□□□□□ -0.71
PTCD1-205ENST00000485746 POM121Q96HA1 1249 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 KCNJ15Q99712 375 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 SP140LQ9H930 580 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 SLC25A19Q9HC21 320 aa10.64□□□□□ -0.71
PTCD1-205ENST00000485746 PNRC2Q9NPJ4 139 aaKnown RBP10.64□□□□□ -0.71
PTCD1-205ENST00000485746 ENOPH1Q9UHY7 261 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms