RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 OR8B4Q96RC9 309 aa17.15■□□□□ 0.34
COL6A2-208ENST00000485591 NIPAL2Q9H841 368 aa17.15■□□□□ 0.34
COL6A2-208ENST00000485591 ROS1P08922 2347 aa17.15■□□□□ 0.34
COL6A2-208ENST00000485591 A0A1W2PQL4 384 aaPredicted RBP17.14■□□□□ 0.33
COL6A2-208ENST00000485591 VSTM5A8MXK1 200 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 PRR32B1ATL7 298 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 APOC1P02654 83 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 LCKP06239 509 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 TUBG1P23258 451 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 ERVS71-1P61550 626 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 PPP1CBP62140 327 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 EGR3Q06889 387 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 LAIR2Q6ISS4 152 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 RGS7BPQ6MZT1 257 aaPredicted RBP17.14■□□□□ 0.33
COL6A2-208ENST00000485591 KRT77Q7Z794 578 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 DTX2Q86UW9 622 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.14■□□□□ 0.33
COL6A2-208ENST00000485591 FBXL14Q8N1E6 418 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 MUC15Q8N387 334 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 NRGNQ92686 78 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 COG8Q96MW5 612 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 TBX5Q99593 518 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 DOK1Q99704 481 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 C1QTNF5Q9BXJ0 243 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 TTTY10Q9BZA0 68 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 LIME1Q9H400 295 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 TUBG2Q9NRH3 451 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 SLCO1C1Q9NYB5 712 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 CMAHPQ9Y471 501 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 LRP12Q9Y561 859 aa17.14■□□□□ 0.33
COL6A2-208ENST00000485591 H3BSA7 217 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF254O75437 659 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 FADS2O95864 444 aaKnown RBP17.13■□□□□ 0.33
COL6A2-208ENST00000485591 OR4A8P0C604 315 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 SLC6A9P48067 706 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 CX3CR1P49238 355 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 PRKXP51817 358 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 EFNB3Q15768 340 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 MSMPQ1L6U9 139 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 KLHL22Q53GT1 634 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 AGAP6Q5VW22 663 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 SSX6Q7RTT6 188 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF679Q8IYX0 411 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF283Q8N7M2 679 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 MRPL24Q96A35 216 aaKnown RBP17.13■□□□□ 0.33
COL6A2-208ENST00000485591 MROQ9BYG7 248 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 EDARQ9UNE0 448 aa17.13■□□□□ 0.33
COL6A2-208ENST00000485591 IRGMA1A4Y4 181 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 IGHA1P01876 353 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 RAF1P04049 648 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 SOD3P08294 240 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF250P15622 560 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 DCTDP32321 178 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 SERPINF1P36955 418 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 PSMA6P60900 246 aaKnown RBP17.12■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF85Q03923 595 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 NAA40Q86UY6 237 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 ACBD7Q8N6N7 88 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 OR52I1Q8NGK6 324 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 SLC25A40Q8TBP6 338 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 IGFBPL1Q8WX77 278 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 MARS2Q96GW9 593 aaKnown RBP17.12■□□□□ 0.33
COL6A2-208ENST00000485591 TRAF4Q9BUZ4 470 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-208ENST00000485591 CBLN4Q9NTU7 201 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 PLCXD1Q9NUJ7 323 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 ST6GALNAC2Q9UJ37 374 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 IKZF2Q9UKS7 526 aa17.12■□□□□ 0.33
COL6A2-208ENST00000485591 PSMD9O00233 223 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 LCATP04180 440 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 RIDAP52758 137 aaKnown RBP17.11■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF718Q3SXZ3 478 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF684Q5T5D7 378 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 C11orf71Q6IPW1 123 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 OR5L1Q8NGL2 311 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 CCL19Q99731 98 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 JAM3Q9BX67 310 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 MRPL37Q9BZE1 423 aaKnown RBP17.11■□□□□ 0.33
COL6A2-208ENST00000485591 OR2J1Q9GZK6 312 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 POFUT1Q9H488 388 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 PLK3Q9H4B4 646 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 SP140LQ9H930 580 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 FGF20Q9NP95 211 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-208ENST00000485591 INPP5EQ9NRR6 644 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 LAMP3Q9UQV4 416 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 MYRFQ9Y2G1 1151 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 STARD10Q9Y365 291 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 CENPEQ02224 2701 aa17.11■□□□□ 0.33
COL6A2-208ENST00000485591 IGLV3-9A0A075B6K5 115 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 DAPL1A0PJW8 107 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 B9A039 149 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 ATE1O95260 518 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 CD8AP01732 235 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 KRT8P05787 483 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 PIPP12273 146 aaPredicted RBP17.1■□□□□ 0.33
COL6A2-208ENST00000485591 EVX1P49640 407 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 ZNF121P58317 390 aaPredicted RBP17.1■□□□□ 0.33
COL6A2-208ENST00000485591 SWI5Q1ZZU3 235 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 MST1LQ2TV78 715 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 SNAI3Q3KNW1 292 aa17.1■□□□□ 0.33
COL6A2-208ENST00000485591 SPATA46Q5T0L3 261 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms