RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 ZNF81P51508 661 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 GRB2P62993 217 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TNK1Q13470 666 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 MSMPQ1L6U9 139 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 PCGF3Q3KNV8 242 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TEX30Q5JUR7 227 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 LINC01590Q5TEZ4 76 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ZBTB49Q6ZSB9 765 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 GID4Q8IVV7 300 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ZCCHC24Q8N2G6 241 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 CBR4Q8N4T8 237 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ZNF283Q8N7M2 679 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 BBS1Q8NFJ9 593 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TMEM163Q8TC26 289 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 THEM6Q8WUY1 208 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 MARS2Q96GW9 593 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 IL4I1Q96RQ9 567 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 PIMREGQ9BSJ6 248 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 GABARAPL3Q9BY60 117 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 SP140LQ9H930 580 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 PTTG3PQ9NZH4 202 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TMEFF2Q9UIK5 374 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 LAMP5Q9UJQ1 280 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 N6AMT1Q9Y5N5 214 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ACANP16112 2415 aa10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 MAP1AP78559 2803 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ARFGEF3Q5TH69 2177 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 C17orf100A8MU93 164 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 M0R129 80 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 NDUFS8O00217 210 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 LY6HO94772 140 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ALPLP05186 524 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ANXA2P07355 339 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 LYNP07948 512 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 MRPL3P09001 348 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 INHBBP09529 407 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 H2BFMP0C1H6 154 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ACSM4P0C7M7 580 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 FOSL1P15407 271 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 SLC25A16P16260 332 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 SELEP16581 610 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TNFSF4P23510 183 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TSTQ16762 297 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ZIK1Q3SY52 487 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 NXNL2Q5VZ03 156 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 C12orf73Q69YU5 71 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 DRAM2Q6UX65 266 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 MRPL21Q7Z2W9 205 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ZNF540Q8NDQ6 660 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 FAM81AQ8TBF8 368 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 UBASH3BQ8TF42 649 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 CMBLQ96DG6 245 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 COX4I2Q96KJ9 171 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 CNN2Q99439 309 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 KCNJ15Q99712 375 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 EGLN1Q9GZT9 426 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TOR3AQ9H497 397 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 PNRC2Q9NPJ4 139 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 DDX28Q9NUL7 540 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 USE1Q9NZ43 259 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 STARD10Q9Y365 291 aa10.04□□□□□ -0.8
CDK5RAP2-217ENST00000484546 LOC390937A0A1W2PQ73 354 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ANKRD65E5RJM6 399 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TBX1O43435 398 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 SPRY3O43610 288 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 RAC2P15153 192 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 EPHA2P29317 976 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ATP6V1E1P36543 226 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 CX3CR1P49238 355 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 PRKXP51817 358 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 RCN1Q15293 331 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 PCK2Q16822 640 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 DNM1P46Q6ZS02 220 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 MEPCEQ7L2J0 689 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 SLC16A9Q7RTY1 509 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 KRT77Q7Z794 578 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TIGD4Q8IY51 512 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 CIARTQ8N365 385 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 OR8J1Q8NGP2 316 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 OTOSQ8NHW6 89 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 RFKQ969G6 155 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ZNF582Q96NG8 517 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 DIRC2Q96SL1 478 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TEAD3Q99594 435 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 ABHD6Q9BV23 337 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 REG4Q9BYZ8 158 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 MARCH7Q9H992 704 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 SAP30LQ9HAJ7 183 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 DNAJC27Q9NZQ0 273 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 PURGQ9UJV8 347 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 TMEM14AQ9Y6G1 99 aa10.03□□□□□ -0.8
CDK5RAP2-217ENST00000484546 IGHV4-30-2A0A087WSY4 118 aa10.02□□□□□ -0.81
CDK5RAP2-217ENST00000484546 SNTNA6NMZ2 147 aa10.02□□□□□ -0.81
CDK5RAP2-217ENST00000484546 PSKH1P11801 424 aa10.02□□□□□ -0.81
CDK5RAP2-217ENST00000484546 ANPEPP15144 967 aa10.02□□□□□ -0.81
CDK5RAP2-217ENST00000484546 SLC2A5P22732 501 aa10.02□□□□□ -0.81
CDK5RAP2-217ENST00000484546 POLR2IP36954 125 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms