RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 RIMKLAQ8IXN7 391 aa9.39□□□□□ -0.91
COL12A1-207ENST00000483888 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
COL12A1-207ENST00000483888 OR2A1Q8NGT9 310 aa9.39□□□□□ -0.91
COL12A1-207ENST00000483888 C2orf15Q8WU43 125 aaKnown RBP9.39□□□□□ -0.91
COL12A1-207ENST00000483888 TMEM255BQ8WV15 326 aa9.39□□□□□ -0.91
COL12A1-207ENST00000483888 AMDHD1Q96NU7 426 aa9.39□□□□□ -0.91
COL12A1-207ENST00000483888 ELF5Q9UKW6 265 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-207ENST00000483888 UBE2L5PA0A1B0GUS4 154 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 TMEM210A6NLX4 147 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 MFNGO00587 321 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 SNCGO76070 127 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 TMEM267Q0VDI3 215 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 ZNF626Q68DY1 528 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 BTNL3Q6UXE8 466 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 DLEU7Q6UYE1 221 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 TRAPPC2LQ9UL33 140 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 P2RY10O00398 339 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 ABLIM3O94929 683 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 TBPP20226 339 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 GJA4P35212 333 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 RAB38P57729 211 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 HES1Q14469 280 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 MKXQ8IYA7 352 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 ISG20L2Q9H9L3 353 aaKnown RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 H7C1C5 153 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 PIGPP57054 158 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 COL9A2Q14055 689 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 ATOH1Q92858 354 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 EMG1Q92979 244 aaKnown RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 HGDQ93099 445 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 NEIL2Q969S2 332 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 H3BML4 177 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 C22orf39Q6P5X5 142 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 CDRT4Q8N9R6 151 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 LMF2Q9BU23 707 aaKnown RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 TAS2R4Q9NYW5 299 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 PIK3C2BO00750 1634 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 PTHLHP12272 177 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 CEBPBP17676 345 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 PPIAP62937 165 aaKnown RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 SHC2P98077 582 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 GLIPR1L1Q6UWM5 242 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 CXCL14O95715 111 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 GABRA1P14867 456 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 PAX5Q02548 391 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 NPSR1Q6W5P4 371 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 ADAT3Q96EY9 351 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 C1QTNF3Q9BXJ4 246 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 ADGRL4Q9HBW9 690 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 MEGF6O75095 1541 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 PLSCR5A0PG75 271 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 SDCBPO00560 298 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 NRASP01111 189 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 HRASP01112 189 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 KRASP01116 189 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 IAPPP10997 89 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 COMPP49747 757 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-207ENST00000483888 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 CLEC14AQ86T13 490 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 CHST14Q8NCH0 376 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 FOXJ1Q92949 421 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 SMIM19Q96E16 107 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 RTP3Q9BQQ7 232 aa9.38□□□□□ -0.91
COL12A1-207ENST00000483888 WNT10BO00744 389 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 ZNF737O75373 536 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 CTSSP25774 331 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 PITX1P78337 314 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-207ENST00000483888 ALKBH7Q9BT30 221 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-207ENST00000483888 SOX21Q9Y651 276 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-207ENST00000483888 NEURL4Q96JN8 1562 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 CTNSO60931 367 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 IFITM2Q01629 132 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 ELFN2Q5R3F8 820 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 FBXO46Q6PJ61 603 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-207ENST00000483888 DCXRQ7Z4W1 244 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 GPR32P1Q8NGA4 272 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 TNFRSF13CQ96RJ3 184 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 A4GALTQ9NPC4 353 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 ANKRD30BLA7E2S9 258 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 VSTM5A8MXK1 200 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 TCN2P20062 427 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 SLC6A1P30531 599 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 Q6ZVL8 140 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 METTL1Q9UBP6 276 aaKnown RBP9.37□□□□□ -0.91
COL12A1-207ENST00000483888 SLIT2O94813 1529 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 MPC2O95563 127 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 CRYBB2P43320 205 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 UQCRFS1P47985 274 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 TMEM128Q5BJH2 165 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 WBP2NLQ6ICG8 309 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 TMEM229BQ8NBD8 167 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 RAB7BQ96AH8 199 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 PEX11GQ96HA9 241 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 MAGT1Q9H0U3 335 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 PRSS16Q9NQE7 514 aa9.37□□□□□ -0.91
COL12A1-207ENST00000483888 ACER3Q9NUN7 267 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms