RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PBOV1Q9GZY1 135 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 RBFOX1Q9NWB1 397 aaKnown RBP23.09■■□□□ 1.29
SHOX2-204ENST00000483851 FOXJ3Q9UPW0 622 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 A0A0G2JMP0 313 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 A0A0X1KG70 313 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 AIPO00170 330 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 TRAPPC2P0DI81 140 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 TRAPPC2BP0DI82 140 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 MAGEB1P43366 347 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 ODF4Q2M2E3 257 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 TUSC5Q8IXB3 177 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 SAMD12Q8N8I0 201 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 OR4M2Q8NGB6 313 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 PPP1R14AQ96A00 147 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 ZNF837Q96EG3 531 aaPredicted RBP23.08■■□□□ 1.29
SHOX2-204ENST00000483851 ALKBH3Q96Q83 286 aaPredicted RBP23.08■■□□□ 1.29
SHOX2-204ENST00000483851 CAMK2AQ9UQM7 478 aa23.08■■□□□ 1.29
SHOX2-204ENST00000483851 NCOA6Q14686 2063 aaPredicted RBP23.07■■□□□ 1.28
SHOX2-204ENST00000483851 IFITM5A6NNB3 132 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 CCNKO75909 580 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 FSTP19883 344 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 CFPP27918 469 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 KCNJ8Q15842 424 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 CEACAM16Q2WEN9 425 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 ELFN2Q5R3F8 820 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 Q6ZS92 163 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 LRRTM1Q86UE6 522 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 TRMT10AQ8TBZ6 339 aaKnown RBP23.07■■□□□ 1.28
SHOX2-204ENST00000483851 PLSCR2Q9NRY7 297 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 DKK4Q9UBT3 224 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 PAIP2BQ9ULR5 123 aaKnown RBP23.07■■□□□ 1.28
SHOX2-204ENST00000483851 LOC107986453A0A1B0GWG9 222 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 KRT33AO76009 404 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 TTRP02766 147 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 ATF1P18846 271 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 SPINK2P20155 84 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 PCBD1P61457 104 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 SCRN3Q0VDG4 424 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 ECH1Q13011 328 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 RNF121Q9H920 327 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 GLRX2Q9NS18 164 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 CKLFQ9UBR5 152 aa23.07■■□□□ 1.28
SHOX2-204ENST00000483851 A0A0B4J293 547 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 PAHP00439 452 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 OTX1P32242 354 aaPredicted RBP23.06■■□□□ 1.28
SHOX2-204ENST00000483851 EIF2S3P41091 472 aaKnown RBP23.06■■□□□ 1.28
SHOX2-204ENST00000483851 TSPO2Q5TGU0 170 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 LINGO2Q7L985 606 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 LRRC18Q8N456 261 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 GFI1Q99684 422 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 HDHD2Q9H0R4 259 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 SLC25A18Q9H1K4 315 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 SPATA2Q9UM82 520 aa23.06■■□□□ 1.28
SHOX2-204ENST00000483851 HMX3A6NHT5 357 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 SLC22A20A6NK97 555 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 ACSM4P0C7M7 580 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 CCDC92Q53HC0 331 aaPredicted RBP23.05■■□□□ 1.28
SHOX2-204ENST00000483851 RPUSD3Q6P087 351 aaKnown RBP23.05■■□□□ 1.28
SHOX2-204ENST00000483851 ZNF627Q7L945 461 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 ADGRE4PQ86SQ3 457 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 SLC22A24Q8N4F4 322 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 APH1AQ96BI3 265 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 SARAFQ96BY9 339 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 FBXO17Q96EF6 278 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 CALHM2Q9HA72 323 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 TNRC6AQ8NDV7 1962 aaKnown RBP23.05■■□□□ 1.28
SHOX2-204ENST00000483851 LYRM1O43325 122 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 CX3CR1P49238 355 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 SCAND1P57086 179 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 RAB35Q15286 201 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 C3AR1Q16581 482 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 MZT2BQ6NZ67 158 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 ZNF433Q8N7K0 673 aaPredicted RBP23.05■■□□□ 1.28
SHOX2-204ENST00000483851 ENKURQ8TC29 256 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 TRIM63Q969Q1 353 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 ORAI1Q96D31 301 aa23.05■■□□□ 1.28
SHOX2-204ENST00000483851 FARS2O95363 451 aaKnown RBP23.04■■□□□ 1.28
SHOX2-204ENST00000483851 TALDO1P37837 337 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 DDOSTP39656 456 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 PITPNBP48739 271 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 ZNF121P58317 390 aaPredicted RBP23.04■■□□□ 1.28
SHOX2-204ENST00000483851 SIAH3Q8IW03 269 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 ZNF283Q8N7M2 679 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 OR13C3Q8NGS6 347 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 OR5H6Q8NGV6 325 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 ST6GAL2Q96JF0 529 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 SLC7A10Q9NS82 523 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 POU2F3Q9UKI9 436 aa23.04■■□□□ 1.28
SHOX2-204ENST00000483851 TRAV8-7A0A075B6U6 113 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 MEGF11A6BM72 1044 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 ANXA2P2A6NMY6 339 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 ZNF587BE7ETH6 402 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 ANXA2P07355 339 aaKnown RBP23.03■■□□□ 1.28
SHOX2-204ENST00000483851 ADRA2CP18825 462 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 PRKXP51817 358 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 SPACA3Q8IXA5 215 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 UBE2J2Q8N2K1 259 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 SPTSSAQ969W0 71 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 PLEK2Q9NYT0 353 aa23.03■■□□□ 1.28
SHOX2-204ENST00000483851 SLC5A6Q9Y289 635 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms