RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PALLDQ8WX93 1383 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 UBN2Q6ZU65 1347 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 OR6C74A6NCV1 312 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 BPY2O14599 106 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 CCNKO75909 580 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF286BP0CG31 522 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 GSTM3P21266 225 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 CASQ1P31415 396 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 NBL1P41271 181 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 RPS23P62266 143 aaKnown RBP3.2□□□□□ -1.9
SF3B1-210ENST00000482158 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 CHRFAM7AQ494W8 412 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 MRPL55Q7Z7F7 128 aaKnown RBP3.2□□□□□ -1.9
SF3B1-210ENST00000482158 FAM71AQ8IYT1 594 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 LGI3Q8N145 548 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF461Q8TAF7 563 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 CIRBP-AS1Q8TBR5 109 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 CFAP53Q96M91 514 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 GSDMAQ96QA5 445 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 ANP32EQ9BTT0 268 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 RSPO3Q9BXY4 272 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-210ENST00000482158 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 TRMT112Q9UI30 125 aaKnown RBP3.2□□□□□ -1.9
SF3B1-210ENST00000482158 TBC1D24Q9ULP9 559 aa3.2□□□□□ -1.9
SF3B1-210ENST00000482158 RCL1Q9Y2P8 373 aaKnown RBP3.2□□□□□ -1.9
SF3B1-210ENST00000482158 PHLPP2Q6ZVD8 1323 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 BRWD3Q6RI45 1802 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 IGHV1OR15-9A0A0B4J2B8 117 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 A0A0J9YXV3 536 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 A6NDN8 102 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 WRBO00258 174 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 NVLO15381 856 aaKnown RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 LSM8O95777 96 aaKnown RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 HBE1P02100 147 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 CLTAP09496 248 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 OR8U9P0C7N5 309 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 OR56A5P0C7T3 313 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 NPY1RP25929 384 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 CDKN2DP55273 166 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 SYNJ2BPP57105 145 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 UBE2MP61081 183 aaKnown RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 IRF8Q02556 426 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 IFT88Q13099 833 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 TWF2Q6IBS0 349 aaKnown RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 CLEC2AQ6UVW9 174 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 SLC16A13Q7RTY0 426 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 CALHM1Q8IU99 346 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 ARRDC1Q8N5I2 433 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 RGP1Q92546 391 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 NRBF2Q96F24 287 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF488Q96MN9 340 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 ELOVL6Q9H5J4 265 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 MRPS30Q9NP92 439 aaKnown RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 CLN6Q9NWW5 311 aa3.19□□□□□ -1.9
SF3B1-210ENST00000482158 COL27A1Q8IZC6 1860 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 AHDC1Q5TGY3 1603 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-210ENST00000482158 PLA2R1Q13018 1463 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 REM1O75628 298 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 MPZL1O95297 269 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 ANXA8P13928 327 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 HMOX2P30519 316 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 RPS5P46782 204 aaKnown RBP3.18□□□□□ -1.9
SF3B1-210ENST00000482158 SLC11A1P49279 550 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 DGCR6Q14129 220 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF266Q14584 549 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 LY6EQ16553 131 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 TPTE2P1Q5T6R2 138 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 ANXA8L1Q5VT79 327 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 WDFY1Q8IWB7 410 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF561Q8N587 486 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 OR11H7Q8NGC8 314 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 OR52K2Q8NGK3 314 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 OR51E1Q8TCB6 317 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 RNF5Q99942 180 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 FOXC2Q99958 501 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 SLC38A10Q9HBR0 1119 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 CCNB1IP1Q9NPC3 277 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 GGA2Q9UJY4 613 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 NOTCH2Q04721 2471 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 ANKRD12Q6UB98 2062 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 FHOD3Q2V2M9 1422 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 PCDH11XQ9BZA7 1347 aa3.18□□□□□ -1.9
SF3B1-210ENST00000482158 C5orf63A6NC05 138 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 H0YJW9 148 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 PLPP1O14494 284 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 HLA-DQA1P01909 254 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 RAB4AP20338 218 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 OPRK1P41145 380 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 ATP5OP48047 213 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 GFERP55789 205 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF121P58317 390 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-210ENST00000482158 GCSAMLQ5JQS6 135 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 SHISA6Q6ZSJ9 500 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 CBR4Q8N4T8 237 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF615Q8N8J6 731 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 NECAP1Q8NC96 275 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 DEDD2Q8WXF8 326 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 DCPSQ96C86 337 aaKnown RBP3.17□□□□□ -1.9
SF3B1-210ENST00000482158 MTG1Q9BT17 334 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-210ENST00000482158 SCRT1Q9BWW7 348 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms