RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 DEFB108BQ8NET1 73 aa15.6■□□□□ 0.09
CLK1-211ENST00000481641 MEGF10Q96KG7 1140 aa15.6■□□□□ 0.09
CLK1-211ENST00000481641 ZNF582Q96NG8 517 aaPredicted RBP15.6■□□□□ 0.09
CLK1-211ENST00000481641 SUCNR1Q9BXA5 334 aa15.6■□□□□ 0.09
CLK1-211ENST00000481641 NSRP1Q9H0G5 558 aaKnown RBP15.6■□□□□ 0.09
CLK1-211ENST00000481641 HDHD2Q9H0R4 259 aa15.6■□□□□ 0.09
CLK1-211ENST00000481641 F5H5K5 113 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 F5H5P2 479 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 TRIM77I1YAP6 450 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 J3QW42 95 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 MLNRO43193 412 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 SELEP16581 610 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 NOS3P29474 1203 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 CLEC12AQ5QGZ9 265 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 PGBD2Q6P3X8 592 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 PGM2L1Q6PCE3 622 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 ZBTB46Q86UZ6 589 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 ZDHHC21Q8IVQ6 265 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 OR52E2Q8NGJ4 325 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 OR13G1Q8NGZ3 307 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 GNPDA2Q8TDQ7 276 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 FAM216AQ8WUB2 273 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 PITX2Q99697 317 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 EGLN3Q9H6Z9 239 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 TAGLN3Q9UI15 199 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 TMCC3Q9ULS5 477 aa15.59■□□□□ 0.09
CLK1-211ENST00000481641 CEACAM18A8MTB9 384 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 F5H0A9 414 aaPredicted RBP15.58■□□□□ 0.08
CLK1-211ENST00000481641 ATP8B1O43520 1251 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 HLA-DQA2P01906 255 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 HLA-DPB1P04440 258 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 ACSM4P0C7M7 580 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 PYCR1P32322 319 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 GGT2P36268 569 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 MDH2P40926 338 aaKnown RBP15.58■□□□□ 0.08
CLK1-211ENST00000481641 RPS27P42677 84 aaKnown RBP15.58■□□□□ 0.08
CLK1-211ENST00000481641 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLK1-211ENST00000481641 ZNF154Q13106 437 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 KRTAP27-1Q3LI81 207 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 FAM201AQ5SY85 155 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 ZNF620Q6ZNG0 422 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 COLCA1Q6ZS62 124 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 MOGAT3Q86VF5 341 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 DEFB107AQ8IZN7 70 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 ZDHHC22Q8N966 263 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 OR9Q2Q8NGE9 314 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 ZNRF4Q8WWF5 429 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 GCDHQ92947 438 aaPredicted RBP15.58■□□□□ 0.08
CLK1-211ENST00000481641 DVL3Q92997 716 aaPredicted RBP15.58■□□□□ 0.08
CLK1-211ENST00000481641 SLC30A2Q9BRI3 323 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 CDADC1Q9BWV3 514 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 IL1RAPQ9NPH3 570 aa15.58■□□□□ 0.08
CLK1-211ENST00000481641 PNRC2Q9NPJ4 139 aaKnown RBP15.58■□□□□ 0.08
CLK1-211ENST00000481641 MRPL22Q9NWU5 206 aaKnown RBP15.58■□□□□ 0.08
CLK1-211ENST00000481641 PPIAL4EA0A075B759 164 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 PPIAL4CA0A0B4J2A2 164 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 IQCF6A8MYZ5 107 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 PPIAL4DF5H284 164 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 PPIAL4FP0DN26 164 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 ZNF12P17014 697 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 PMELP40967 661 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 GNGT1P63211 74 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 TRAP1Q12931 704 aaKnown RBP15.57■□□□□ 0.08
CLK1-211ENST00000481641 TSPAN31Q12999 210 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 KLF17Q5JT82 389 aaPredicted RBP15.57■□□□□ 0.08
CLK1-211ENST00000481641 SLC27A4Q6P1M0 643 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 CYP2R1Q6VVX0 501 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 CYB561A3Q8NBI2 242 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 OR2AJ1Q8NGZ0 328 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 JMJD8Q96S16 334 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 C1QTNF5Q9BXJ0 243 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 TMEM165Q9HC07 324 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 CYB5R1Q9UHQ9 305 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 POLR3KQ9Y2Y1 108 aaPredicted RBP15.57■□□□□ 0.08
CLK1-211ENST00000481641 PPIAL4AQ9Y536 164 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 INSIG2Q9Y5U4 225 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 AUP1Q9Y679 476 aa15.57■□□□□ 0.08
CLK1-211ENST00000481641 TMEM89A2RUT3 159 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 TVP23AA6NH52 213 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 LCATP04180 440 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 WNT2P09544 360 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 ATP6V1B2P21281 511 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 ANOS1P23352 680 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 IFNGR2P38484 337 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 SRP9P49458 86 aaKnown RBP15.56■□□□□ 0.08
CLK1-211ENST00000481641 MXRA7P84157 204 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 PPP1R8Q12972 351 aaKnown RBP15.56■□□□□ 0.08
CLK1-211ENST00000481641 GK2Q14410 553 aaPredicted RBP15.56■□□□□ 0.08
CLK1-211ENST00000481641 SLC36A3Q495N2 470 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 ARMCX4Q5H9R4 360 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 LYPD4Q6UWN0 246 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 BCL6BQ8N143 479 aaPredicted RBP15.56■□□□□ 0.08
CLK1-211ENST00000481641 SLCO4A1Q96BD0 722 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 MAP6Q96JE9 813 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 ATF6BQ99941 703 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 BTBD10Q9BSF8 475 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 RBM4Q9BWF3 364 aaKnown RBP15.56■□□□□ 0.08
CLK1-211ENST00000481641 HCAR1Q9BXC0 346 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 PLA2G12AQ9BZM1 189 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 TMEM100Q9NV29 134 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms