RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 ESCO2Q56NI9 601 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 CLEC12AQ5QGZ9 265 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 SLC27A4Q6P1M0 643 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
PTPN7-212ENST00000480836 C9orf139Q6ZV77 190 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 FKBP9P1Q75LS8 142 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 LINC00346Q8IVM7 164 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 FITM2Q8N6M3 262 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 OR13G1Q8NGZ3 307 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 LZICQ8WZA0 190 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 SSBP3Q9BWW4 388 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-212ENST00000480836 MS4A7Q9GZW8 240 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-212ENST00000480836 PNRC2Q9NPJ4 139 aaKnown RBP11.08□□□□□ -0.64
PTPN7-212ENST00000480836 TUBG2Q9NRH3 451 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 CTSZQ9UBR2 303 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 RPS6KA6Q9UK32 745 aa11.08□□□□□ -0.64
PTPN7-212ENST00000480836 TRAV40A0A0B4J280 105 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 IQCF6A8MYZ5 107 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 CLDN34H7C241 214 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 XKRYO14609 159 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 TNFRSF13BO14836 293 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 HOXA3O43365 443 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 PPP1R3DO95685 299 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 TXNDC12O95881 172 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 RPS2P15880 293 aaKnown RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 TNFSF4P23510 183 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 RPS27P42677 84 aaKnown RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 ELF3P78545 371 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 GK2Q14410 553 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 MAPRE2Q15555 327 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 ZNF404Q494X3 552 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 PRAMEF6Q5VXH4 476 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 RUSC1-AS1Q66K80 236 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 OR10S1Q8NGN2 331 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 OR52J3Q8NH60 311 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 RP9Q8TA86 221 aaKnown RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 RSRC1Q96IZ7 334 aaKnown RBP11.07□□□□□ -0.64
PTPN7-212ENST00000480836 NMNAT3Q96T66 252 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 MRI1Q9BV20 369 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 RASSF4Q9H2L5 321 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 FN3KQ9H479 309 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 TNFRSF19Q9NS68 423 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 LRCH1Q9Y2L9 728 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 DOCK11Q5JSL3 2073 aa11.07□□□□□ -0.64
PTPN7-212ENST00000480836 A0A1W2PRQ8 180 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 OR6C68A6NDL8 312 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 H1F0P07305 194 aaKnown RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 SFTPBP07988 381 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 VIMP08670 466 aaKnown RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 ACSM4P0C7M7 580 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 TROVE2P10155 538 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 GGT2P36268 569 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 CENPAP49450 140 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 RAD23AP54725 363 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 GNB2P62879 340 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 DEFA6Q01524 100 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 COX10Q12887 443 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 DGCR6Q14129 220 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 WDR25Q64LD2 544 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 GPR139Q6DWJ6 353 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 SLC18B1Q6NT16 456 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 LYPD4Q6UWN0 246 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 FGFRL1Q8N441 504 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 RNF148Q8N7C7 305 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 SLC26A10Q8NG04 563 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 OR4K13Q8NH42 304 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 APOBEC3DQ96AK3 386 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 TMIGD2Q96BF3 282 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 MAP6Q96JE9 813 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 DHRS1Q96LJ7 313 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 ZNF582Q96NG8 517 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 ERMAPQ96PL5 475 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 DDOQ99489 341 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 COQ7Q99807 217 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 PRDM13Q9H4Q3 707 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 UFSP2Q9NUQ7 469 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 MRPL22Q9NWU5 206 aaKnown RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 ADA2Q9NZK5 511 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 PDP1Q9P0J1 537 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-212ENST00000480836 OR5V1Q9UGF6 321 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 TMCC3Q9ULS5 477 aa11.06□□□□□ -0.64
PTPN7-212ENST00000480836 UNC119BA6NIH7 251 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 F5H5K5 113 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 GSTA4O15217 222 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 SURF4O15260 269 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 FAM20BO75063 409 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 SEMG1P04279 462 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 PPIAL4GP0DN37 164 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 HIST1H1CP16403 213 aaKnown RBP11.05□□□□□ -0.64
PTPN7-212ENST00000480836 FPR3P25089 353 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 IFNA8P32881 189 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 PSMB10P40306 273 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 FGF12P61328 243 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 ZNF181Q2M3W8 571 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 RFX4Q33E94 735 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 FGD3Q5JSP0 725 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 ZNF362Q5T0B9 420 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-212ENST00000480836 SFRP4Q6FHJ7 346 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms