RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 LYVE1Q9Y5Y7 322 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 LHFPL6Q9Y693 200 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 ARRDC5A6NEK1 342 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 IQCF6A8MYZ5 107 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 B2RBV5 119 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 TRIM77I1YAP6 450 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 CUBNO60494 3623 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 IGHV2-70P01814 119 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 FUT4P22083 530 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 FPR2P25090 351 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 SLC15A1P46059 708 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCM2-213ENST00000480658 CCDC92Q53HC0 331 aaPredicted RBP9.69□□□□□ -0.86
CCM2-213ENST00000480658 ESCO2Q56NI9 601 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 SLC18B1Q6NT16 456 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 DRAM2Q6UX65 266 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 COLCA1Q6ZS62 124 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 RHOUQ7L0Q8 258 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 C1QL2Q7Z5L3 287 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 KLBQ86Z14 1044 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 OR6V1Q8N148 313 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 FTMTQ8N4E7 242 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 SPERTQ8NA61 448 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 ATG16L2Q8NAA4 619 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 SDR9C7Q8NEX9 313 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 OR52E2Q8NGJ4 325 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 NSL1Q96IY1 281 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 PLEKHA8Q96JA3 519 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 CCT8L2Q96SF2 557 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 DGCR6LQ9BY27 220 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 ZMAT3Q9HA38 289 aaKnown RBP9.69□□□□□ -0.86
CCM2-213ENST00000480658 NTN4Q9HB63 628 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 LPAR2Q9HBW0 351 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 SRA1Q9HD15 236 aaKnown RBP9.69□□□□□ -0.86
CCM2-213ENST00000480658 DDX28Q9NUL7 540 aaKnown RBP9.69□□□□□ -0.86
CCM2-213ENST00000480658 TBC1D23Q9NUY8 699 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 TMEM100Q9NV29 134 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 ARL8BQ9NVJ2 186 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 UBAP1Q9NZ09 502 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 OR5V1Q9UGF6 321 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 POLR3KQ9Y2Y1 108 aaPredicted RBP9.69□□□□□ -0.86
CCM2-213ENST00000480658 STARD10Q9Y365 291 aa9.69□□□□□ -0.86
CCM2-213ENST00000480658 RIIAD1A6NNX1 92 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 A8MXK9 166 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 BHLHE40O14503 412 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 PLPP2O43688 288 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 SCG5P05408 212 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 RAP2AP10114 183 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 EPHA1P21709 976 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 PAICSP22234 425 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 CFL1P23528 166 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 FMO3P31513 532 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 GATA4P43694 442 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 MMP16P51512 607 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 TRAP1Q12931 704 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 KRTAP27-1Q3LI81 207 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 KRTAP24-1Q3LI83 254 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 OR2T5Q6IEZ7 315 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 RBMS3Q6XE24 437 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 PGAP1Q75T13 922 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 MRPL21Q7Z2W9 205 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 LRRC28Q86X40 367 aaPredicted RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 LNX2Q8N448 690 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 PLPP7Q8NBV4 271 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 OR11L1Q8NGX0 322 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 OR2T29Q8NH02 315 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 TEX47Q8TBZ9 253 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 SPRYD4Q8WW59 207 aaPredicted RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 GPA33Q99795 319 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 SLC30A2Q9BRI3 323 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 MRI1Q9BV20 369 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 RBM4Q9BWF3 364 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 TOR3AQ9H497 397 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 MIOXQ9UGB7 285 aa9.68□□□□□ -0.86
CCM2-213ENST00000480658 SAMHD1Q9Y3Z3 626 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 FBN1P35555 2871 aaKnown RBP9.68□□□□□ -0.86
CCM2-213ENST00000480658 RTTNQ86VV8 2226 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 SVEP1Q4LDE5 3571 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 TANC2Q9HCD6 1990 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.67□□□□□ -0.86
CCM2-213ENST00000480658 A0A1B0GWJ7 208 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 OR6C68A6NDL8 312 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 F5H5K5 113 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 M0R135 149 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 DYNC1I1O14576 645 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 XRCC2O43543 280 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 GMDSO60547 372 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 ACSM4P0C7M7 580 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 PPIAL4GP0DN37 164 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 ADRA2CP18825 462 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 GGT2P36268 569 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 SLC6A9P48067 706 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 SLC25A1P53007 311 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 HILS1P60008 231 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 GRB2P62993 217 aaKnown RBP9.67□□□□□ -0.86
CCM2-213ENST00000480658 MICAQ29983 383 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 DNAL1Q4LDG9 190 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 TEX30Q5JUR7 227 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms