RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 NSMAFQ92636 917 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 MRPL48Q96GC5 212 aaKnown RBP7.68□□□□□ -1.18
DDX56-211ENST00000479602 MAP6Q96JE9 813 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 ATF6BQ99941 703 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 TRAF4Q9BUZ4 470 aaPredicted RBP7.68□□□□□ -1.18
DDX56-211ENST00000479602 C1QTNF5Q9BXJ0 243 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 YTHDF1Q9BYJ9 559 aaKnown RBP7.68□□□□□ -1.18
DDX56-211ENST00000479602 Q9H521 79 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 SP140LQ9H930 580 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 SEC61A2Q9H9S3 476 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 NOX3Q9HBY0 568 aa7.68□□□□□ -1.18
DDX56-211ENST00000479602 SRA1Q9HD15 236 aaKnown RBP7.68□□□□□ -1.18
DDX56-211ENST00000479602 FGF20Q9NP95 211 aaPredicted RBP7.68□□□□□ -1.18
DDX56-211ENST00000479602 H2AFY2Q9P0M6 372 aaPredicted RBP7.68□□□□□ -1.18
DDX56-211ENST00000479602 IGLV3-9A0A075B6K5 115 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 A0A096LPE4 126 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 A0A1W2PPZ6 126 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 EFCAB10A6NFE3 127 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 DHRS7CA6NNS2 312 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 RNF223E7ERA6 249 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 ZNF593O00488 134 aaPredicted RBP7.67□□□□□ -1.18
DDX56-211ENST00000479602 CD5LO43866 347 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 DOK2O60496 412 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 ENTPD6O75354 484 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 FADS2O95864 444 aaKnown RBP7.67□□□□□ -1.18
DDX56-211ENST00000479602 CD3EP07766 207 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 LYNP07948 512 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 CLUP10909 449 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 DBTP11182 482 aaKnown RBP7.67□□□□□ -1.18
DDX56-211ENST00000479602 NR4A1P22736 598 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 STOMP27105 288 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 PYCR1P32322 319 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 PSMA6P60900 246 aaKnown RBP7.67□□□□□ -1.18
DDX56-211ENST00000479602 ACTA2P62736 377 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 ACTG2P63267 376 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 BSPH1Q075Z2 132 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 SGCAQ16586 387 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 KLHL22Q53GT1 634 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 FAM209AQ5JX71 171 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 C11orf71Q6IPW1 123 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 FDX2Q6P4F2 183 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 UGT2A3Q6UWM9 527 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 PRSS45Q7RTY3 260 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 DPY19L4Q7Z388 723 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 ZNF679Q8IYX0 411 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 GALNT4Q8N4A0 578 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 CPEB3Q8NE35 698 aaKnown RBP7.67□□□□□ -1.18
DDX56-211ENST00000479602 CCDC54Q8NEL0 328 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 OR10S1Q8NGN2 331 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 OR6K6Q8NGW6 343 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 OR1F12Q8NHA8 337 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 FGFBP3Q8TAT2 258 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 FBXW5Q969U6 566 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 SPSB4Q96A44 273 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 KCNJ15Q99712 375 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 SH3GL3Q99963 347 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 ZNF649Q9BS31 505 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 ABHD6Q9BV23 337 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 RGCCQ9H4X1 137 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 ELOVL3Q9HB03 270 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 PLEK2Q9NYT0 353 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 DIMT1Q9UNQ2 313 aaKnown RBP7.67□□□□□ -1.18
DDX56-211ENST00000479602 SPEF1Q9Y4P9 236 aa7.67□□□□□ -1.18
DDX56-211ENST00000479602 CHD3Q12873 2000 aaKnown RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 HEATR1Q9H583 2144 aaKnown RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 LOC100509620A0A075B734 347 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 A0A0U1RQV5 110 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 SEC14L2O76054 403 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 ABHD16AO95870 558 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 IGLV3-1P01715 115 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 GYPBP06028 91 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 ADH4P08319 380 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 GNAO1P09471 354 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 ZNF250P15622 560 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 APLNRP35414 380 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 RAD52P43351 418 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 GDI2P50395 445 aaKnown RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 IDH3GP51553 393 aaPredicted RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 CDK5R2Q13319 367 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 RSPO1Q2MKA7 263 aaPredicted RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 ZIK1Q3SY52 487 aaPredicted RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 CDONQ4KMG0 1287 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 KLHL12Q53G59 568 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 C9orf135Q5VTT2 229 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 MBNL2Q5VZF2 373 aaKnown RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 LAIR2Q6ISS4 152 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 FBXW12Q6X9E4 464 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 CFAP77Q6ZQR2 320 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 DCXRQ7Z4W1 244 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 ERI1Q8IV48 349 aaKnown RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 ACBD7Q8N6N7 88 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 ZNF511Q8NB15 262 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 MAPK1IP1LQ8NDC0 245 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 KBTBD8Q8NFY9 601 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 OR52H1Q8NGJ2 320 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 RPS4Y2Q8TD47 263 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 CYGBQ8WWM9 190 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 SPTSSAQ969W0 71 aa7.66□□□□□ -1.18
DDX56-211ENST00000479602 ZMYND19Q96E35 227 aaPredicted RBP7.66□□□□□ -1.18
DDX56-211ENST00000479602 TRMT61AQ96FX7 289 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms