RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 MVKQ03426 396 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 SNTB2Q13425 540 aaKnown RBP17.19■□□□□ 0.34
ACTB-210ENST00000477812 MSMPQ1L6U9 139 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 KRT80Q6KB66 452 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 DRAM2Q6UX65 266 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 NAA40Q86UY6 237 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 SPTSSAQ969W0 71 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 ZNF799Q96GE5 643 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 C1QTNF5Q9BXJ0 243 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 PLEKHF2Q9H8W4 249 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 ERVK13-1Q9NX77 482 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 GRIP1Q9Y3R0 1128 aa17.19■□□□□ 0.34
ACTB-210ENST00000477812 ABCA12Q86UK0 2595 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 ZNF254O75437 659 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 SRSF10O75494 262 aaKnown RBP17.18■□□□□ 0.34
ACTB-210ENST00000477812 FAM157BP0CG42 384 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 LIMS3P0CW19 117 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 LIMS4P0CW20 117 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 CRHBPP24387 322 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 DCKP27707 260 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 DCTDP32321 178 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 TPTEP56180 551 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 PSMA6P60900 246 aaKnown RBP17.18■□□□□ 0.34
ACTB-210ENST00000477812 SLC35A2P78381 396 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 TAF13Q15543 124 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 CDONQ4KMG0 1287 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 AHSA2Q719I0 299 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 KRT77Q7Z794 578 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 TMEM171Q8WVE6 324 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 SGCDQ92629 289 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 AKAP1Q92667 903 aaKnown RBP eCLIP17.18■□□□□ 0.34
ACTB-210ENST00000477812 RNF166Q96A37 237 aaPredicted RBP17.18■□□□□ 0.34
ACTB-210ENST00000477812 SIGLEC11Q96RL6 698 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 DOK1Q99704 481 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 DUSP21Q9H596 190 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 ZNF442Q9H7R0 627 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 NIPAL2Q9H841 368 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 ELOVL3Q9HB03 270 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 CA10Q9NS85 328 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 ATP23Q9Y6H3 246 aa17.18■□□□□ 0.34
ACTB-210ENST00000477812 DAPL1A0PJW8 107 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 C5orf63A6NC05 138 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 J3QW42 95 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 HS3ST1O14792 307 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 SULT1C4O75897 302 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 GLRXP35754 106 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 CX3CR1P49238 355 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 RGS6P49758 472 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 PRKXP51817 358 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 ERVS71-1P61550 626 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 ST3GAL4Q11206 333 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 GALEQ14376 348 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 TMEM200AQ86VY9 491 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 ABHD4Q8TB40 342 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 TMEM80Q96HE8 168 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 MROQ9BYG7 248 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 BCL2L14Q9BZR8 327 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 OR51B6Q9H340 312 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 IKZF2Q9UKS7 526 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 SPEF1Q9Y4P9 236 aa17.17■□□□□ 0.34
ACTB-210ENST00000477812 FLNBO75369 2602 aaKnown RBP17.17■□□□□ 0.34
ACTB-210ENST00000477812 HSD11B1P28845 292 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 THBS4P35443 961 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 RAD52P43351 418 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 ETV1P50549 477 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 ZNF121P58317 390 aaPredicted RBP17.16■□□□□ 0.34
ACTB-210ENST00000477812 KRTAP10-9P60411 292 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 MED21Q13503 144 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 ADIPOQQ15848 244 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 SNAI3Q3KNW1 292 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 LHFPL3Q86UP9 236 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 ZNF786Q8N393 782 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 APOBEC3DQ96AK3 386 aaPredicted RBP17.16■□□□□ 0.34
ACTB-210ENST00000477812 ALG8Q9BVK2 526 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 POFUT1Q9H488 388 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 FAM206AQ9NX38 181 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 CISD1Q9NZ45 108 aaKnown RBP17.16■□□□□ 0.34
ACTB-210ENST00000477812 EIF3KQ9UBQ5 218 aaKnown RBP17.16■□□□□ 0.34
ACTB-210ENST00000477812 POU2F3Q9UKI9 436 aa17.16■□□□□ 0.34
ACTB-210ENST00000477812 APCP25054 2843 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 METTL15A6NJ78 407 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 PNPP00491 289 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 KRT8P05787 483 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 CDK1P06493 297 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 SLC2A1P11166 492 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 C21orf33P30042 268 aaPredicted RBP17.15■□□□□ 0.34
ACTB-210ENST00000477812 RIDAP52758 137 aaKnown RBP17.15■□□□□ 0.34
ACTB-210ENST00000477812 PPP1CBP62140 327 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 MFGE8Q08431 387 aaPredicted RBP17.15■□□□□ 0.34
ACTB-210ENST00000477812 TP53I3Q53FA7 332 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 RBM48Q5RL73 367 aaKnown RBP17.15■□□□□ 0.34
ACTB-210ENST00000477812 LIPNQ5VXI9 398 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 ARL9Q6T311 187 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 PLEKHG7Q6ZR37 379 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.15■□□□□ 0.34
ACTB-210ENST00000477812 SYS1Q8N2H4 156 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 ZNF283Q8N7M2 679 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 ZNF540Q8NDQ6 660 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 OR1J1Q8NGS3 322 aa17.15■□□□□ 0.34
ACTB-210ENST00000477812 SNX33Q8WV41 574 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms