RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 KCNG3Q8TAE7 436 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 AMELYQ99218 206 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 GSX2Q9BZM3 304 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 GLTPQ9NZD2 209 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 GDF2Q9UK05 429 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-204ENST00000477421 B3GALT5Q9Y2C3 310 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 UBE2J1Q9Y385 318 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-204ENST00000477421 PCDHGA5Q9Y5G8 931 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 FNDC1Q4ZHG4 1894 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-204ENST00000477421 MRPL33O75394 65 aaKnown RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 IL32P24001 234 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 OPRM1P35372 400 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 LUMP51884 338 aaPredicted RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 CAPZA1P52907 286 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 EIF5AP63241 154 aaKnown RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 EXOSC2Q13868 293 aaKnown RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 C21orf62-AS1Q17RA5 79 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 RNLSQ5VYX0 342 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PLCXD3Q63HM9 321 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 VASH2Q86V25 355 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 OR1M1Q8NGA1 313 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 ALKBH3Q96Q83 286 aaPredicted RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PATE3B3GLJ2 98 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 FADS1O60427 444 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PDGFAP04085 211 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 LPLP06858 475 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 CAV2P51636 162 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 DCAF12Q5T6F0 453 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 MRPL21Q7Z2W9 205 aaKnown RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 ST8SIA1Q92185 356 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 VOPP1Q96AW1 172 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PAPOLGQ9BWT3 736 aaKnown RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PBOV1Q9GZY1 135 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 GPR173Q9NS66 373 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 HAO2Q9NYQ3 351 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PIGLQ9Y2B2 252 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PI4KAP42356 2102 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 GJE1A6NN92 205 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 TGFBR3LH3BV60 316 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 CXCL13O43927 109 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 EDN3P14138 238 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 ACHEP22303 614 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 FAM74A1Q5RGS3 127 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF813Q6ZN06 617 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 ADGRG3Q86Y34 549 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 SULF2Q8IWU5 870 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 SGCZQ96LD1 299 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 NECAB3Q96P71 396 aaPredicted RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 CCNL2Q96S94 520 aaPredicted RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 CMSS1Q9BQ75 279 aaKnown RBP9.9□□□□□ -0.82
COL27A1-204ENST00000477421 PPA2Q9H2U2 334 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 RAB22AQ9UL26 194 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 KCNS2Q9ULS6 477 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 R4GMQ9 66 aa9.9□□□□□ -0.82
COL27A1-204ENST00000477421 SLC17A2O00624 439 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 OGG1O15527 345 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 CNOT4O95628 575 aaKnown RBP9.9□□□□□ -0.83
COL27A1-204ENST00000477421 DDAH2O95865 285 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 SPINK2P20155 84 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 HRH1P35367 487 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 SLC25A1P53007 311 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF121P58317 390 aaPredicted RBP9.9□□□□□ -0.83
COL27A1-204ENST00000477421 TAF9Q16594 264 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 NLRC3Q7RTR2 1065 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 RABEPKQ7Z6M1 372 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 SGPP2Q8IWX5 399 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 TCTE3Q8IZS6 198 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 DUSP18Q8NEJ0 188 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 WDR89Q96FK6 387 aaPredicted RBP9.9□□□□□ -0.83
COL27A1-204ENST00000477421 DCAF16Q9NXF7 216 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 FOXJ3Q9UPW0 622 aa9.9□□□□□ -0.83
COL27A1-204ENST00000477421 hCG_1807616A0A1W2PRN6 198 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 BET1O15155 118 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 XRCC3O43542 346 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 CER1O95813 267 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 FREM3P0C091 2139 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 PATE4P0C8F1 98 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 FAHP16930 419 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 IL11P20809 199 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 LTBRP36941 435 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 EIF1P41567 113 aaKnown RBP9.89□□□□□ -0.83
COL27A1-204ENST00000477421 RPS18P62269 152 aaKnown RBP9.89□□□□□ -0.83
COL27A1-204ENST00000477421 MGAT2Q10469 447 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ESCO2Q56NI9 601 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 CADM4Q8NFZ8 388 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 CD300LFQ8TDQ1 290 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ZNRF4Q8WWF5 429 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 PARP12Q9H0J9 701 aaKnown RBP9.89□□□□□ -0.83
COL27A1-204ENST00000477421 HRH4Q9H3N8 390 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 MYOTQ9UBF9 498 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ICAM5Q9UMF0 924 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 MTCL1Q9Y4B5 1905 aaKnown RBP9.89□□□□□ -0.83
COL27A1-204ENST00000477421 A0A096LPE4 126 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 A0A1W2PPZ6 126 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 A6NJY4 79 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 OR4C45A6NMZ5 311 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ANGPTL7O43827 346 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 CCL4P13236 92 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 AVPR2P30518 371 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms