RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PNKDQ8N490 385 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 OR13G1Q8NGZ3 307 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 LRRC8CQ8TDW0 803 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 PLEKHA8Q96JA3 519 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 SIRPDQ9H106 197 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 SYT4Q9H2B2 425 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 IGHV3OR15-7A0A075B7D8 119 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 IGHV1-69DA0A0B4J2H0 117 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 A0A1B0GUS0 222 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 GMNCA6NCL1 334 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 A6NIZ1 184 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 IQCF6A8MYZ5 107 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF879B4DU55 563 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 SOCS2O14508 198 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ENSAO43768 121 aaKnown RBP9.89□□□□□ -0.83
HDAC6-219ENST00000476625 IGF2P01344 180 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 IGHV1-69P01742 117 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 FPR3P25089 353 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 RPL4P36578 427 aaKnown RBP9.89□□□□□ -0.83
HDAC6-219ENST00000476625 PSMB10P40306 273 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 GUCA1AP43080 201 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-219ENST00000476625 IER3P46695 156 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 RAD23AP54725 363 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 RAP1BP61224 184 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ARF6P62330 175 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 RAP1AP62834 184 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 PRKCDQ05655 676 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 AQP6Q13520 282 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 BEAN1Q3B7T3 259 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 TTMPQ5BVD1 217 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 Q6ZPA2 131 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 DCDC5Q6ZRR9 648 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF826PQ6ZT77 177 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 NLRC3Q7RTR2 1065 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 FAM122BQ7Z309 247 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 LINC00346Q8IVM7 164 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 C11orf44Q8N8P7 122 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 PRRC1Q96M27 445 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF583Q96ND8 569 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF582Q96NG8 517 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF570Q96NI8 536 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 WDFY2Q96P53 400 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 TOR3AQ9H497 397 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 NOX4Q9NPH5 578 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ACOXLQ9NUZ1 547 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 ADA2Q9NZK5 511 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 RPS6KA6Q9UK32 745 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 SIGLEC9Q9Y336 463 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 LHFPL6Q9Y693 200 aa9.89□□□□□ -0.83
HDAC6-219ENST00000476625 PLXNB1O43157 2135 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 A0A087WUU8 490 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 PRSS37A4D1T9 235 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 PHYHO14832 338 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 ADAM20O43506 726 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 OR10H3O60404 316 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 GYPAP02724 150 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 TFF1P04155 84 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 NR2C1P13056 603 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 CENPAP49450 140 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 FXYD6P3P58550 94 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 EGR3Q06889 387 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 KLRD1Q13241 179 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 KRR1Q13601 381 aaKnown RBP9.88□□□□□ -0.83
HDAC6-219ENST00000476625 CFAP77Q6ZQR2 320 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 LYG1Q8N1E2 194 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 SCCPDHQ8NBX0 429 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 SSMEM1Q8WWF3 244 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 RASSF5Q8WWW0 418 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 DYRK2Q92630 601 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 ITPKCQ96DU7 683 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 FAM46AQ96IP4 442 aaKnown RBP9.88□□□□□ -0.83
HDAC6-219ENST00000476625 ECSITQ9BQ95 431 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 NUAK2Q9H093 628 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 FN3KQ9H479 309 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 GRHPRQ9UBQ7 328 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 BAG5Q9UL15 447 aa9.88□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF816-ZNF321PA0A0X1KG74 233 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 ELOVL7A1L3X0 281 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 P2RY10O00398 339 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 ALX3O95076 343 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 PSKH1P11801 424 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 CA6P23280 308 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 PAX6P26367 422 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 CDKN2AP42771 156 aaKnown RBP9.87□□□□□ -0.83
HDAC6-219ENST00000476625 ST3GAL3Q11203 375 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 GK2Q14410 553 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF181Q2M3W8 571 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 BEND6Q5SZJ8 279 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-219ENST00000476625 FAM205BPQ63HN1 556 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 VMO1Q7Z5L0 202 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 TSEN54Q7Z6J9 526 aaKnown RBP9.87□□□□□ -0.83
HDAC6-219ENST00000476625 CROCCP2Q86T23 111 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 TMEM86BQ8N661 226 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 PCYOX1LQ8NBM8 494 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 GATAD2BQ8WXI9 593 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 SLCO4A1Q96BD0 722 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 SEH1LQ96EE3 360 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 FAM71F1Q96KD3 344 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-219ENST00000476625 TMEM100Q9NV29 134 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms