RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 THBS4P35443 961 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 CXCR4P61073 352 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 NKX6-1P78426 367 aaPredicted RBP12.4□□□□□ -0.42
CCNL1-217ENST00000476367 ZNF544Q6NX49 715 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 SPATC1Q76KD6 591 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 PRSS45Q7RTY3 260 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 TBX5Q99593 518 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 SLCO1C1Q9NYB5 712 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 PSORS1C1Q9UIG5 152 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 SPEF1Q9Y4P9 236 aa12.4□□□□□ -0.42
CCNL1-217ENST00000476367 MYO9AB2RTY4 2548 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 AKAP9Q99996 3911 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 SLC1A7O00341 560 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 LYNP07948 512 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 OR4A8P0C604 315 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 APOBEC3AP31941 199 aaPredicted RBP12.39□□□□□ -0.43
CCNL1-217ENST00000476367 CDKN1AP38936 164 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 ROM1Q03395 351 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 POU4F2Q12837 409 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 DEFB113Q30KQ7 82 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 TMEM255AQ5JRV8 349 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 AGAP6Q5VW22 663 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 LRRN1Q6UXK5 716 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 THEM6Q8WUY1 208 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 PIGTQ969N2 578 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 COQ7Q99807 217 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 ATF6BQ99941 703 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 TRAF4Q9BUZ4 470 aaPredicted RBP12.39□□□□□ -0.43
CCNL1-217ENST00000476367 HDHD2Q9H0R4 259 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 ZNF442Q9H7R0 627 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 FGF20Q9NP95 211 aaPredicted RBP12.39□□□□□ -0.43
CCNL1-217ENST00000476367 MRM2Q9UI43 246 aaKnown RBP12.39□□□□□ -0.43
CCNL1-217ENST00000476367 ATPIF1Q9UII2 106 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 FZR1Q9UM11 496 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 RPL36Q9Y3U8 105 aaKnown RBP12.39□□□□□ -0.43
CCNL1-217ENST00000476367 ARID1AO14497 2285 aa12.39□□□□□ -0.43
CCNL1-217ENST00000476367 SMPD2O60906 423 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 SRSF10O75494 262 aaKnown RBP12.38□□□□□ -0.43
CCNL1-217ENST00000476367 NGFP01138 241 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 LCKP06239 509 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 ACSM4P0C7M7 580 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 OR2T7P0C7T2 308 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 LIMS3P0CW19 117 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 LIMS4P0CW20 117 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 ERVS71-1P61550 626 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 RAB40BQ12829 278 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 RFPL4BQ6ZWI9 263 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 RHOUQ7L0Q8 258 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 DTX2Q86UW9 622 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 ZNF454Q8N9F8 522 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 BPIFB6Q8NFQ5 453 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 CXorf56Q9H5V9 222 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 CBLN4Q9NTU7 201 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 LAMP5Q9UJQ1 280 aa12.38□□□□□ -0.43
CCNL1-217ENST00000476367 ZNF878C9JN71 531 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 TMCC2O75069 709 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 CD8AP01732 235 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 HTR1AP08908 422 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 CRHBPP24387 322 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 C21orf33P30042 268 aaPredicted RBP12.37□□□□□ -0.43
CCNL1-217ENST00000476367 SERPINF1P36955 418 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ART1P52961 327 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 RPS23P62266 143 aaKnown RBP12.37□□□□□ -0.43
CCNL1-217ENST00000476367 SLC35A2P78381 396 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ZNF485Q8NCK3 441 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 OR10H4Q8NGA5 316 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ABHD4Q8TB40 342 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 IGFBPL1Q8WX77 278 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 PERPQ96FX8 193 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 OR8B4Q96RC9 309 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 JAM3Q9BX67 310 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 CACNG6Q9BXT2 260 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 POFUT1Q9H488 388 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 DUSP21Q9H596 190 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 CENPMQ9NSP4 180 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ZNF319Q9P2F9 582 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 EIF3KQ9UBQ5 218 aaKnown RBP12.37□□□□□ -0.43
CCNL1-217ENST00000476367 GRIP1Q9Y3R0 1128 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 LRP12Q9Y561 859 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 CELSR1Q9NYQ6 3014 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 PNPP00491 289 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 PIPP12273 146 aaPredicted RBP12.37□□□□□ -0.43
CCNL1-217ENST00000476367 GLRXP35754 106 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ETV1P50549 477 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 UCP2P55851 309 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ST3GAL4Q11206 333 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 C11orf71Q6IPW1 123 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 RGS7BPQ6MZT1 257 aaPredicted RBP12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
CCNL1-217ENST00000476367 PLEKHG7Q6ZR37 379 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 LHFPL3Q86UP9 236 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 ACBD7Q8N6N7 88 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 OR1J1Q8NGS3 322 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 MBD6Q96DN6 1003 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 SYT3Q9BQG1 590 aa12.37□□□□□ -0.43
CCNL1-217ENST00000476367 BCL2L14Q9BZR8 327 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms