RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CRABP1P29762 137 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 GATA4P43694 442 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 KCNMB1Q16558 191 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 DEFB112Q30KQ8 113 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 OTPQ5XKR4 325 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 BRD3OSQ6XYD6 125 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 DCDC5Q6ZRR9 648 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 CYP4Z1Q86W10 505 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 FITM2Q8N6M3 262 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 CELF2-AS1Q8N7Q2 184 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 OR11L1Q8NGX0 322 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 TAF15Q92804 592 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDRT1-205ENST00000475944 ERGIC1Q969X5 290 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 FAM46AQ96IP4 442 aaKnown RBP9.04□□□□□ -0.96
CDRT1-205ENST00000475944 GPX7Q96SL4 187 aaPredicted RBP9.04□□□□□ -0.96
CDRT1-205ENST00000475944 NOX4Q9NPH5 578 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 NRIP3Q9NQ35 241 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 SAR1AQ9NR31 198 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 TMEM100Q9NV29 134 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 KIF17Q9P2E2 1029 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 SIGLEC7Q9Y286 467 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 SOX21Q9Y651 276 aaPredicted RBP9.04□□□□□ -0.96
CDRT1-205ENST00000475944 PKD1L1Q8TDX9 2849 aa9.04□□□□□ -0.96
CDRT1-205ENST00000475944 A0A1B0GWJ7 208 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 CXCR6O00574 342 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 SOCS2O14508 198 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 GSTA4O15217 222 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 CENPAP49450 140 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 NPY4RP50391 375 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 RPS6KA3P51812 740 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 RAG2P55895 527 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 FGF12P61328 243 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 HIST1H3AP68431 136 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 KCNJ8Q15842 424 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 FAM201AQ5SY85 155 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 HIST2H3PS2Q5TEC6 136 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 WDR25Q64LD2 544 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-205ENST00000475944 FIP1L1Q6UN15 594 aaKnown RBP9.03□□□□□ -0.96
CDRT1-205ENST00000475944 HIST2H3AQ71DI3 136 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 CBLL1Q75N03 491 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 TMEM86BQ8N661 226 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 KIR3DL3Q8N743 410 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 Q8TCH9 128 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 SLC7A13Q8TCU3 470 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 HSH2DQ96JZ2 352 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 NUAK2Q9H093 628 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 WDR76Q9H967 626 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 KRCC1Q9NPI7 259 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-205ENST00000475944 IER3IP1Q9Y5U9 82 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
CDRT1-205ENST00000475944 A0A1W2PRQ8 180 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 P2RY10O00398 339 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 IMPA2O14732 288 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 PTP4A3O75365 173 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 NDUFA7O95182 113 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 TXNDC12O95881 172 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 SERPINA1P01009 418 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 HLA-DPB1P04440 258 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 LIPFP07098 398 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 H1F0P07305 194 aaKnown RBP9.02□□□□□ -0.97
CDRT1-205ENST00000475944 PMELP40967 661 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 RPL15P61313 204 aaKnown RBP9.02□□□□□ -0.97
CDRT1-205ENST00000475944 LIPEQ05469 1076 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 COX10Q12887 443 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 MALLQ13021 153 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 DGCR6Q14129 220 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 MEP1BQ16820 701 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 FGD3Q5JSP0 725 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 CD276Q5ZPR3 534 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 OLFML2AQ68BL7 652 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 LYPD2Q6UXB3 125 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 Q6YL49 198 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 DPY19L2P2Q6ZN68 376 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 PTCHD4Q6ZW05 846 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 HDXQ7Z353 690 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.02□□□□□ -0.97
CDRT1-205ENST00000475944 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 RCN3Q96D15 328 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 RSRC1Q96IZ7 334 aaKnown RBP9.02□□□□□ -0.97
CDRT1-205ENST00000475944 FAM71F1Q96KD3 344 aaPredicted RBP9.02□□□□□ -0.97
CDRT1-205ENST00000475944 TECTBQ96PL2 329 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 PCGF1Q9BSM1 259 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 CDADC1Q9BWV3 514 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 MARCH7Q9H992 704 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 TNFRSF19Q9NS68 423 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 CMTM6Q9NX76 183 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 ERVK-18Q9QC07 812 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 RPS6KA6Q9UK32 745 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 AURKCQ9UQB9 309 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 NOP16Q9Y3C1 178 aaKnown RBP9.02□□□□□ -0.97
CDRT1-205ENST00000475944 FAM32AQ9Y421 112 aaKnown RBP9.02□□□□□ -0.97
CDRT1-205ENST00000475944 LHFPL6Q9Y693 200 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 POMT1Q9Y6A1 747 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 ENPP4Q9Y6X5 453 aa9.02□□□□□ -0.97
CDRT1-205ENST00000475944 TRRAPQ9Y4A5 3859 aa9.01□□□□□ -0.97
CDRT1-205ENST00000475944 C22orf46C9J442 243 aa9.01□□□□□ -0.97
CDRT1-205ENST00000475944 M0QZ24 198 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms