RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PSMB1P20618 241 aaKnown RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 ENPP1P22413 925 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 ERP29P30040 261 aaKnown RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 DLSTP36957 453 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 EIF1AXP47813 144 aaKnown RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 GZMKP49863 264 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 CCR6P51684 374 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 ZNF121P58317 390 aaPredicted RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 MRPS34P82930 218 aaKnown RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 QRFPP83859 136 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 CD83Q01151 205 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 MAB21L1Q13394 359 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 SEZ6L2Q6UXD5 910 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 FGD2Q7Z6J4 655 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 GLRX5Q86SX6 157 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 PIP4P1Q86T03 277 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 YRDCQ86U90 279 aaKnown RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 PIAS4Q8N2W9 510 aaPredicted RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 CCDC54Q8NEL0 328 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 OR1M1Q8NGA1 313 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 OR8B12Q8NGG6 310 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 OR6N1Q8NGY5 312 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 GPX8Q8TED1 209 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 SSC4DQ8WTU2 575 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 FGGYQ96C11 551 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 ADAT3Q96EY9 351 aaPredicted RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 THOC3Q96J01 351 aaKnown RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 DMRTB1Q96MA1 342 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 JSRP1Q96MG2 331 aaPredicted RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 IP6K3Q96PC2 410 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 SORCS2Q96PQ0 1159 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 NUDT16L1Q9BRJ7 211 aaKnown RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 UQCC2Q9BRT2 126 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 ZNF416Q9BWM5 594 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 C20orf85Q9H1P6 137 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 KCNK15Q9H427 330 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 SCPEP1Q9HB40 452 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 ZFP64Q9NPA5 681 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 TMEM138Q9NPI0 162 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 MCUBQ9NWR8 336 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 CGGBP1Q9UFW8 167 aaPredicted RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 ZNF107Q9UII5 783 aaPredicted RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 POLR1DQ9Y2S0 133 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 DOCK10Q96BY6 2186 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 TRAV6A0A075B6T7 132 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 A0A1B0GUH1 482 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 FAM172BPA6NC97 362 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.65□□□□□ -1.02
USP39-214ENST00000474572 RER1O15258 196 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 CYTIPO60759 359 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 ATP6V1G1O75348 118 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 PEX14O75381 377 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 RBBP9O75884 186 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 ALDOBP05062 364 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 IL5P05113 134 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 HPNP05981 417 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 CSF1P09603 554 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 SULT1A3P0DMM9 295 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 SULT1A4P0DMN0 295 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 PTHLHP12272 177 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 STOMP27105 288 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 CX3CR1P49238 355 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 SELENOPP49908 381 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 CLDN15P56746 228 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 SPOCK1Q08629 439 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 TNK1Q13470 666 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 CDK10Q15131 360 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 FCN2Q15485 313 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 CCDC92Q53HC0 331 aaPredicted RBP8.65□□□□□ -1.02
USP39-214ENST00000474572 GLYATL3Q5SZD4 288 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 HES3Q5TGS1 186 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 FAM27BQ5VT28 67 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 MTFR2Q6P444 385 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 NCCRP1Q6ZVX7 275 aaPredicted RBP8.65□□□□□ -1.02
USP39-214ENST00000474572 DOK3Q7L591 496 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 OR5AS1Q8N127 324 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 SLC22A24Q8N4F4 322 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 GJC3Q8NFK1 279 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 OR2M7Q8NG81 312 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 OR4D6Q8NGJ1 314 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 OR14K1Q8NGZ2 314 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 OR2V1Q8NHB1 315 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 OR14L1PQ8NHC6 308 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 TMEM45BQ96B21 275 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 FAM173AQ9BQD7 235 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 OR51J1Q9H342 316 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 ZNF703Q9H7S9 590 aaPredicted RBP8.65□□□□□ -1.02
USP39-214ENST00000474572 ING3Q9NXR8 418 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 LRFN1Q9P244 771 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 ZNF319Q9P2F9 582 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 ITGB1BP2Q9UKP3 347 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 BOKQ9UMX3 212 aaPredicted RBP8.65□□□□□ -1.02
USP39-214ENST00000474572 SLC5A6Q9Y289 635 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 NPTNQ9Y639 398 aa8.65□□□□□ -1.02
USP39-214ENST00000474572 TRAV18A0A075B6X5 111 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 A0A0U1RQV5 110 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 TMEM14DPA8MWL7 114 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ICMTO60725 284 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ALX3O95076 343 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 NDUFB6O95139 128 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms