RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 YIPF6Q96EC8 236 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 C4orf45Q96LM5 186 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 DMRTA2Q96SC8 542 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 DCLRE1CQ96SD1 692 aaKnown RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 NGBQ9NPG2 151 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 SLC17A5Q9NRA2 495 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 CKLFQ9UBR5 152 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ERRFI1Q9UJM3 462 aaPredicted RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 DHDHQ9UQ10 334 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 MAP1BP46821 2468 aaKnown RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 OR5H1A6NKK0 313 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 FAM90A27PA6NNH2 459 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 A8MXE2 369 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 B8ZZF3 427 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 E9PI62 339 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 C16orf97H3BN30 126 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 H3BSA7 217 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 OGG1O15527 345 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 LRRTM2O43300 516 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 SYNGR3O43761 229 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 MTRF1O75570 445 aaKnown RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 GABARAPO95166 117 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 LCATP04180 440 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 CD1AP06126 327 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 PPP3CBP16298 524 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF20P17024 532 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 GALP22466 123 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 CFL1P23528 166 aaKnown RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 APEX1P27695 318 aaKnown RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 SOX6P35712 828 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 SERPINB10P48595 397 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 IDH3GP51553 393 aaPredicted RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 FOXG1P55316 489 aaPredicted RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 RPS25P62851 125 aaKnown RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 HIST1H3AP68431 136 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 PPA1Q15181 289 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 TSC22D1Q15714 1073 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 C4orf17Q53FE4 359 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 WDR38Q5JTN6 314 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 TIMM23BQ5SRD1 257 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF684Q5T5D7 378 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 HIST2H3PS2Q5TEC6 136 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 FDX2Q6P4F2 183 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 USP43Q70EL4 1123 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 HIST2H3AQ71DI3 136 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 CATSPERDQ86XM0 798 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF485Q8NCK3 441 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 SLC30A7Q8NEW0 376 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 OR5L1Q8NGL2 311 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 OR13C3Q8NGS6 347 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 AKAP1Q92667 903 aaKnown RBP eCLIP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 KCTD7Q96MP8 289 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 PDCD1LG2Q9BQ51 273 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF649Q9BS31 505 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 ACTR6Q9GZN1 396 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 PBOV1Q9GZY1 135 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 WNT5BQ9H1J7 359 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 NUFIP1Q9UHK0 495 aaKnown RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 ST6GALNAC2Q9UJ37 374 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF391Q9UJN7 358 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 HHLA2Q9UM44 414 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 SPTA1P02549 2419 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 INTS1Q8N201 2190 aaKnown RBP8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 PKD1L2Q7Z442 2459 aa8.97□□□□□ -0.97
PRPF38A-202ENST00000474048 LOC107986453A0A1B0GWG9 222 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 A0A1W2PR80 420 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 A6NHS1 94 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 PRR32B1ATL7 298 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 GABRPO00591 440 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 XRCC2O43543 280 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 SYT7O43581 403 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 GATBO75879 557 aaKnown RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 ATE1O95260 518 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 LALBAP00709 142 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 SERPINA5P05154 406 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 MMP7P09237 267 aaPredicted RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 SLC2A1P11166 492 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 ACHEP22303 614 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 NR4A1P22736 598 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 GNLYP22749 145 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 TGFBR2P37173 567 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 MFGE8Q08431 387 aaPredicted RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 SSX1Q16384 188 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 Q499Y3 187 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 C22orf42Q6IC83 251 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF474Q6S9Z5 364 aaPredicted RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 NCCRP1Q6ZVX7 275 aaPredicted RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 CEACAM19Q7Z692 300 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 CCDC54Q8NEL0 328 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 OR10S1Q8NGN2 331 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 HSD17B8Q92506 261 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 S100PBPQ96BU1 408 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 OR51E2Q9H255 320 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 NEK6Q9HC98 313 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 TCF7L1Q9HCS4 588 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 KCNJ16Q9NPI9 418 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 PNRC2Q9NPJ4 139 aaKnown RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 FRRS1LQ9P0K9 344 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms