RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ZBTB46Q86UZ6 589 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 RAB40AQ8WXH6 277 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 FAM162AQ96A26 154 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
CHD3-209ENST00000473376 FAM46AQ96IP4 442 aaKnown RBP11.35□□□□□ -0.59
CHD3-209ENST00000473376 KCTD14Q9BQ13 255 aaPredicted RBP11.35□□□□□ -0.59
CHD3-209ENST00000473376 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
CHD3-209ENST00000473376 TMEM100Q9NV29 134 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 ARMCX1Q9P291 453 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 IER3IP1Q9Y5U9 82 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 LHFPL6Q9Y693 200 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 IGLV1-36A0A0B4J1U3 117 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 IGHV2-70DA0A0C4DH43 119 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 DNAJC9-AS1A6NH13 148 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 UNC119BA6NIH7 251 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 PHYHO14832 338 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 TMPRSS2O15393 492 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 GMNNO75496 209 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 PPP1R3DO95685 299 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 PTBP3O95758 552 aaKnown RBP11.34□□□□□ -0.59
CHD3-209ENST00000473376 LIPFP07098 398 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 PRDX6P30041 224 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 IFNGR2P38484 337 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 GNB2P62879 340 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 KRT72Q14CN4 511 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 KCNJ8Q15842 424 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 RSPO1Q2MKA7 263 aaPredicted RBP11.34□□□□□ -0.59
CHD3-209ENST00000473376 RFX4Q33E94 735 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 PTCHD4Q6ZW05 846 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 KLBQ86Z14 1044 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 POU5F2Q8N7G0 328 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 SLC26A10Q8NG04 563 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 OR52E2Q8NGJ4 325 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 SLC7A6Q92536 515 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 SPAG4Q9NPE6 437 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 TRIM36Q9NQ86 728 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 B9D1Q9UPM9 204 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 POLR1DQ9Y2S0 133 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 PPIAL4AQ9Y536 164 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 MMP24Q9Y5R2 645 aa11.34□□□□□ -0.59
CHD3-209ENST00000473376 SOCS2O14508 198 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 MLNRO43193 412 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 DBHP09172 617 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 RPS2P15880 293 aaKnown RBP11.33□□□□□ -0.6
CHD3-209ENST00000473376 FPR3P25089 353 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 SLC6A6P31641 620 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 MDH1P40925 334 aaKnown RBP11.33□□□□□ -0.6
CHD3-209ENST00000473376 CD200P41217 278 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 RPL15P61313 204 aaKnown RBP11.33□□□□□ -0.6
CHD3-209ENST00000473376 SEC61A1P61619 476 aaKnown RBP11.33□□□□□ -0.6
CHD3-209ENST00000473376 MALLQ13021 153 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 BAMBIQ13145 260 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 HLXQ14774 488 aaPredicted RBP11.33□□□□□ -0.6
CHD3-209ENST00000473376 FGD3Q5JSP0 725 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 ZNF362Q5T0B9 420 aaPredicted RBP11.33□□□□□ -0.6
CHD3-209ENST00000473376 GLYATQ6IB77 296 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 OR2T2Q6IF00 324 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 LEG1Q6P5S2 330 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 DCDC5Q6ZRR9 648 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 OR6V1Q8N148 313 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 PARP8Q8N3A8 854 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 OR8B3Q8NGG8 313 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 C22orf15Q8WYQ4 148 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
CHD3-209ENST00000473376 OR8B2Q96RD0 313 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 TMEM246Q9BRR3 403 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
CHD3-209ENST00000473376 DCTN6O00399 190 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 NDUFA2O43678 99 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 GMDSO60547 372 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 RENP00797 406 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 ACSM4P0C7M7 580 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 IRF2P14316 349 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 PSMB10P40306 273 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 ERFP50548 548 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 NUDT2P50583 147 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 RAD23AP54725 363 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 PSME3P61289 254 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 SEC23BQ15437 767 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 SLC9A3R2Q15599 337 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 SPATS1Q496A3 300 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 SLC18B1Q6NT16 456 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 RPL13AP3Q6NVV1 102 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 C1orf94Q6P1W5 598 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 JAZF1Q86VZ6 243 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 OR11L1Q8NGX0 322 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 OR2AJ1Q8NGZ0 328 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 DMRTB1Q96MA1 342 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 ERMAPQ96PL5 475 aaPredicted RBP11.32□□□□□ -0.6
CHD3-209ENST00000473376 ATF6BQ99941 703 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 RERGLQ9H628 205 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 NOX4Q9NPH5 578 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 MED4Q9NPJ6 270 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 PTTG3PQ9NZH4 202 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 PCDHGB1Q9Y5G3 927 aa11.32□□□□□ -0.6
CHD3-209ENST00000473376 TRBV4-1A0A0J9YWV2 114 aa11.31□□□□□ -0.6
CHD3-209ENST00000473376 SEMG1P04279 462 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms