RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CLDND2Q8NHS1 167 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 PTP4A1Q93096 173 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 SPTSSAQ969W0 71 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 GAL3ST1Q99999 423 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 COPS4Q9BT78 406 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 DGCR6LQ9BY27 220 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 CENPMQ9NSP4 180 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 VNN3Q9NY84 501 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 IL20Q9NYY1 176 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 UBAP1Q9NZ09 502 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 ATPIF1Q9UII2 106 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 PCDHB10Q9UN67 800 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 STARD10Q9Y365 291 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 WNK2Q9Y3S1 2297 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 MXRA5Q9NR99 2828 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 STAB1Q9NY15 2570 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 ZSCAN5BA6NJL1 495 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 B4DSR2 109 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 BHLHE40O14503 412 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 FAM157CP0CG43 387 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 ANPEPP15144 967 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 IGFBP5P24593 272 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 GGT2P36268 569 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 CRYBB2P43320 205 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 MMP15P51511 669 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 RPS7P62081 194 aaKnown RBP9.81□□□□□ -0.84
CPNE1-222ENST00000473373 COX10Q12887 443 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 ECH1Q13011 328 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 CRMP1Q14194 572 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 HLXQ14774 488 aaPredicted RBP9.81□□□□□ -0.84
CPNE1-222ENST00000473373 CR1LQ2VPA4 569 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 FAM120AOSQ5T036 256 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 CFAP77Q6ZQR2 320 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 MRPL21Q7Z2W9 205 aaKnown RBP9.81□□□□□ -0.84
CPNE1-222ENST00000473373 ZBTB46Q86UZ6 589 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 ADGRG5Q8IZF4 528 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 OR8D4Q8NGM9 314 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 ST7LQ8TDW4 575 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF582Q96NG8 517 aaPredicted RBP9.81□□□□□ -0.84
CPNE1-222ENST00000473373 FEVQ99581 238 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 NIPSNAP1Q9BPW8 284 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 POFUT1Q9H488 388 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 WDR76Q9H967 626 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 KCNG2Q9UJ96 466 aa9.81□□□□□ -0.84
CPNE1-222ENST00000473373 J3QW42 95 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 M0R135 149 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 ACOT8O14734 319 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 FKBP6O75344 327 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 CIB2O75838 187 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 ATP5HO75947 161 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 RAC2P15153 192 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 SELEP16581 610 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 HSD11B1P28845 292 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 RPS27P42677 84 aaKnown RBP9.8□□□□□ -0.84
CPNE1-222ENST00000473373 ENTPD1P49961 510 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 OR2T2Q6IF00 324 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF770Q6IQ21 691 aaPredicted RBP9.8□□□□□ -0.84
CPNE1-222ENST00000473373 SLC18B1Q6NT16 456 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 SLC27A4Q6P1M0 643 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 SPATC1Q76KD6 591 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 DCXRQ7Z4W1 244 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 ERI1Q8IV48 349 aaKnown RBP9.8□□□□□ -0.84
CPNE1-222ENST00000473373 LNX2Q8N448 690 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 IQCF1Q8N6M8 205 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF283Q8N7M2 679 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 OR6N2Q8NGY6 317 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 OR4Q3Q8NH05 313 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 OR51F2Q8NH61 342 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 SPRYD4Q8WW59 207 aaPredicted RBP9.8□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF799Q96GE5 643 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 OR51V1Q9H2C8 321 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 TMEM160Q9NX00 188 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 FAM53CQ9NYF3 392 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 TMEFF2Q9UIK5 374 aaPredicted RBP9.8□□□□□ -0.84
CPNE1-222ENST00000473373 POMPQ9Y244 141 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 WIPI2Q9Y4P8 454 aa9.8□□□□□ -0.84
CPNE1-222ENST00000473373 GGT3PA6NGU5 568 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 FAM183AA6NL82 134 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 PRR23D1E9PI22 279 aaPredicted RBP9.79□□□□□ -0.84
CPNE1-222ENST00000473373 TBX1O43435 398 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 ICMTO60725 284 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 DEAF1O75398 565 aaPredicted RBP9.79□□□□□ -0.84
CPNE1-222ENST00000473373 SBK2P0C263 348 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 PRR23D2P0DMB1 279 aaPredicted RBP9.79□□□□□ -0.84
CPNE1-222ENST00000473373 ANXA8P13928 327 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 IRF2P14316 349 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 SPI1P17947 270 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 KITLGP21583 273 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 GRK5P34947 590 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 BLVRAP53004 296 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 EIF2B1Q14232 305 aaKnown RBP9.79□□□□□ -0.84
CPNE1-222ENST00000473373 KLHL12Q53G59 568 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 C1orf146Q5VVC0 180 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 PGAP1Q75T13 922 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 OR10AD1Q8NGE0 317 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 OR13G1Q8NGZ3 307 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 ITLN1Q8WWA0 313 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 HAVCR1Q96D42 359 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 SOX7Q9BT81 388 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF665Q9H7R5 613 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms