RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 TPTEP56180 551 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 MFGE8Q08431 387 aaPredicted RBP11.24□□□□□ -0.61
VPS13D-205ENST00000473099 DYNC1I2Q13409 638 aaKnown RBP11.24□□□□□ -0.61
VPS13D-205ENST00000473099 MOGQ16653 247 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 DRAM2Q6UX65 266 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 Q6ZT83 130 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.24□□□□□ -0.61
VPS13D-205ENST00000473099 SKA3Q8IX90 412 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 OR1F12Q8NHA8 337 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 ZFAND2BQ8WV99 257 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 TSEN15Q8WW01 171 aaKnown RBP11.24□□□□□ -0.61
VPS13D-205ENST00000473099 ACOT12Q8WYK0 555 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 RGP1Q92546 391 aaPredicted RBP11.24□□□□□ -0.61
VPS13D-205ENST00000473099 HTRA1Q92743 480 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
VPS13D-205ENST00000473099 DERL3Q96Q80 235 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 PBOV1Q9GZY1 135 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 SLC25A18Q9H1K4 315 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 PLSCR4Q9NRQ2 329 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 PRSS50Q9UI38 385 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 DHDHQ9UQ10 334 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 SLC5A6Q9Y289 635 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 SHANK1Q9Y566 2161 aa11.24□□□□□ -0.61
VPS13D-205ENST00000473099 TLN1Q9Y490 2541 aaKnown RBP11.24□□□□□ -0.61
VPS13D-205ENST00000473099 TRBV5-7A0A0A0MS05 114 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 A0A0U1RQV5 110 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 TTLL8A6PVC2 850 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 M0R135 149 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 SYNGR3O43761 229 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 MMP7P09237 267 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-205ENST00000473099 TMIGD3P0DMS9 266 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-205ENST00000473099 RAB3BP20337 219 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 KIR2DL2P43627 348 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-205ENST00000473099 PRKXP51817 358 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 ZNF121P58317 390 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-205ENST00000473099 MXD1Q05195 221 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 HNRNPA0Q13151 305 aaKnown RBP11.23□□□□□ -0.61
VPS13D-205ENST00000473099 INSL4Q14641 139 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 MZT2AQ6P582 158 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 GFRALQ6UXV0 394 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 GCNT2Q8N0V5 402 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 CNEP1R1Q8N9A8 125 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 C1orf162Q8NEQ5 155 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-205ENST00000473099 OR52H1Q8NGJ2 320 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 OR1K1Q8NGR3 316 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 OR13C5Q8NGS8 318 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 ITFG2Q969R8 447 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 TMEM106AQ96A25 262 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 ZNF799Q96GE5 643 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 BOD1Q96IK1 185 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 OR2H1Q9GZK4 316 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 TPK1Q9H3S4 243 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 RNF121Q9H920 327 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 TCF7L1Q9HCS4 588 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 HMG20AQ9NP66 347 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 CKLFQ9UBR5 152 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 ZNF391Q9UJN7 358 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 PROCRQ9UNN8 238 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 SLC22A13Q9Y226 551 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 PMF1-BGLAPU3KQ54 211 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 BAHCC1Q9P281 2608 aa11.23□□□□□ -0.61
VPS13D-205ENST00000473099 PRRC2CQ9Y520 2896 aaKnown RBP11.23□□□□□ -0.61
VPS13D-205ENST00000473099 A0A1B0GVI7 797 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 LOC107986453A0A1B0GWG9 222 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 TTRP02766 147 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 ANXA2P07355 339 aaKnown RBP11.22□□□□□ -0.61
VPS13D-205ENST00000473099 ITGA5P08648 1049 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 EDN3P14138 238 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 SRMP19623 302 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 CRYGSP22914 178 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 RANBP1P43487 201 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 HTR5AP47898 357 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 PSG4Q00888 419 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 PLP2Q04941 152 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 C1QTNF12Q5T7M4 302 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 LUZP2Q86TE4 346 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 OR6Q1Q8NGQ2 317 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 SNRNP40Q96DI7 357 aaKnown RBP11.22□□□□□ -0.61
VPS13D-205ENST00000473099 PGAM5Q96HS1 289 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 MRI1Q9BV20 369 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 SFXN3Q9BWM7 321 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 WDR12Q9GZL7 423 aaKnown RBP11.22□□□□□ -0.61
VPS13D-205ENST00000473099 C6orf62Q9GZU0 229 aaPredicted RBP11.22□□□□□ -0.61
VPS13D-205ENST00000473099 WNT5BQ9H1J7 359 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 SMURF1Q9HCE7 757 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 SLC17A5Q9NRA2 495 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 ZNF835Q9Y2P0 537 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 FAM215AQ9Y5M1 114 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 KALRNO60229 2985 aa11.22□□□□□ -0.61
VPS13D-205ENST00000473099 GCN1Q92616 2671 aaKnown RBP11.21□□□□□ -0.61
VPS13D-205ENST00000473099 NOTOA8MTQ0 251 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 F5H5K5 113 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 SYT7O43581 403 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 IL18BPO95998 194 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 ACSM4P0C7M7 580 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 FSTP19883 344 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 COX5AP20674 150 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 CCL1P22362 96 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms