RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 IFNL4K9M1U5 179 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 ARPC2O15144 300 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 FABP3P05413 133 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 COMPP49747 757 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-203ENST00000472892 HMGA2P52926 109 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 SPATS1Q496A3 300 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 SLC18B1Q6NT16 456 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-203ENST00000472892 OR5AS1Q8N127 324 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 DEFB108BQ8NET1 73 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 GNPDA2Q8TDQ7 276 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 DVL3Q92997 716 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-203ENST00000472892 SLC30A2Q9BRI3 323 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 SUCNR1Q9BXA5 334 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 C1QTNF5Q9BXJ0 243 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 RPRD1BQ9NQG5 326 aaKnown RBP12.86□□□□□ -0.35
VTI1A-203ENST00000472892 TAGLN3Q9UI15 199 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 TMCC3Q9ULS5 477 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 NBEAL1Q6ZS30 2694 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 TMEM89A2RUT3 159 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 A8MXK9 166 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 IQCF6A8MYZ5 107 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 F5H0A9 414 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-203ENST00000472892 CPT2P23786 658 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 CFPP27918 469 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 NOS3P29474 1203 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 RRM2P31350 389 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 GGT2P36268 569 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 MDH2P40926 338 aaKnown RBP12.85□□□□□ -0.35
VTI1A-203ENST00000472892 MMP16P51512 607 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 SEC61A1P61619 476 aaKnown RBP12.85□□□□□ -0.35
VTI1A-203ENST00000472892 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-203ENST00000472892 TSPAN31Q12999 210 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 ECH1Q13011 328 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 TUSC1Q2TAM9 212 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 SLC36A3Q495N2 470 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 CFAP77Q6ZQR2 320 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 PIGWQ7Z7B1 504 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 MUC20Q8N307 709 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-203ENST00000472892 MEGF10Q96KG7 1140 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 DDOQ99489 341 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 SLC6A7Q99884 636 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 RBM4Q9BWF3 364 aaKnown RBP12.85□□□□□ -0.35
VTI1A-203ENST00000472892 ARL8BQ9NVJ2 186 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 CYB5R1Q9UHQ9 305 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 ARHGAP32A7KAX9 2087 aa12.85□□□□□ -0.35
VTI1A-203ENST00000472892 H0YL77 283 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 MLNRO43193 412 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 KRT36O76013 467 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 FSTL3O95633 263 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 WNT2P09544 360 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ACSM4P0C7M7 580 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ZNF12P17014 697 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 FPR2P25090 351 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 SRP9P49458 86 aaKnown RBP12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ZNF154Q13106 437 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ZNF181Q2M3W8 571 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 PGBD2Q6P3X8 592 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 C16orf89Q6UX73 402 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ZNF620Q6ZNG0 422 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 LINC00346Q8IVM7 164 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ZDHHC21Q8IVQ6 265 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 BPIFB2Q8N4F0 458 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 OR10AD1Q8NGE0 317 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 OR52E2Q8NGJ4 325 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 OR2AJ1Q8NGZ0 328 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 POP5Q969H6 163 aaKnown RBP12.84□□□□□ -0.35
VTI1A-203ENST00000472892 PITX2Q99697 317 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ATF6BQ99941 703 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 CDADC1Q9BWV3 514 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 HCAR1Q9BXC0 346 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 TMEM165Q9HC07 324 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 PNRC2Q9NPJ4 139 aaKnown RBP12.84□□□□□ -0.35
VTI1A-203ENST00000472892 TMEM100Q9NV29 134 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 ARL2BPQ9Y2Y0 163 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
VTI1A-203ENST00000472892 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 F5H5K5 113 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 SELEP16581 610 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 ACTG1P63261 375 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
VTI1A-203ENST00000472892 GK2Q14410 553 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-203ENST00000472892 NAA40Q86UY6 237 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 DEFB107AQ8IZN7 70 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 ZDHHC22Q8N966 263 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 SDR9C7Q8NEX9 313 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF420Q8TAQ5 688 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-203ENST00000472892 GCDHQ92947 438 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-203ENST00000472892 FN3KQ9H479 309 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 WDR76Q9H967 626 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 NTN4Q9HB63 628 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 ESM1Q9NQ30 184 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 MRPL22Q9NWU5 206 aaKnown RBP12.83□□□□□ -0.36
VTI1A-203ENST00000472892 NDE1Q9NXR1 346 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 IL20Q9NYY1 176 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 KCNG2Q9UJ96 466 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 AUP1Q9Y679 476 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 TENM1Q9UKZ4 2725 aa12.83□□□□□ -0.36
VTI1A-203ENST00000472892 F5H5P2 479 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms