RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CDONQ4KMG0 1287 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 SFRP4Q6FHJ7 346 aaPredicted RBP15.62■□□□□ 0.09
SORT1-203ENST00000471996 BLOC1S3Q6QNY0 202 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 C1orf122Q6ZSJ8 110 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 BTN2A1Q7KYR7 527 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 VMO1Q7Z5L0 202 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 SPERTQ8NA61 448 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 OR5R1Q8NH85 324 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 OR1F12Q8NHA8 337 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 LRRC8CQ8TDW0 803 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 TMEM239Q8WW34 195 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 SPDL1Q96EA4 605 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 KPTNQ9Y664 436 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 A0A1B0GVI7 797 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 A6NIZ1 184 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 FBP2O00757 339 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 OR10H3O60404 316 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 MPIG6BO95866 241 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 ECDO95905 644 aaPredicted RBP15.61■□□□□ 0.09
SORT1-203ENST00000471996 DBHP09172 617 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 KIR2DS4P43632 304 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 MRPL19P49406 292 aaKnown RBP15.61■□□□□ 0.09
SORT1-203ENST00000471996 CTXN1P60606 82 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 RAP1BP61224 184 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 RAP1AP62834 184 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 AQP6Q13520 282 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 C11orf91Q3C1V1 193 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 FOXB2Q5VYV0 432 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 OR4S1Q8NGB4 309 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 APOBEC3DQ96AK3 386 aaPredicted RBP15.61■□□□□ 0.09
SORT1-203ENST00000471996 ECSITQ9BQ95 431 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 CPPED1Q9BRF8 314 aaPredicted RBP15.61■□□□□ 0.09
SORT1-203ENST00000471996 CNTD2Q9H8S5 307 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 KCNK9Q9NPC2 374 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 UFSP2Q9NUQ7 469 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 RNF7Q9UBF6 113 aa15.61■□□□□ 0.09
SORT1-203ENST00000471996 RGS16O15492 202 aaPredicted RBP15.6■□□□□ 0.09
SORT1-203ENST00000471996 NDUFA2O43678 99 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 FCN3O75636 299 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 CD200P41217 278 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 MPPED2Q15777 294 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 KRT71Q3SY84 523 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 PRAMEF6Q5VXH4 476 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 METAP1DQ6UB28 335 aaPredicted RBP15.6■□□□□ 0.09
SORT1-203ENST00000471996 KLHDC1Q8N7A1 406 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 PPP1R35Q8TAP8 253 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 WWC2-AS2Q96NR7 200 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 MED31Q9Y3C7 131 aa15.6■□□□□ 0.09
SORT1-203ENST00000471996 LOC100653049A0A140TA62 436 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 KRT34O76011 436 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 TAS2R41P59536 307 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 STX1BP61266 288 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 CYP51A1Q16850 503 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 CCDC92Q53HC0 331 aaPredicted RBP15.59■□□□□ 0.09
SORT1-203ENST00000471996 INTS11Q5TA45 600 aaKnown RBP15.59■□□□□ 0.09
SORT1-203ENST00000471996 PATL1Q86TB9 770 aaKnown RBP15.59■□□□□ 0.09
SORT1-203ENST00000471996 LYG1Q8N1E2 194 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 BOLLQ8N9W6 283 aaKnown RBP15.59■□□□□ 0.09
SORT1-203ENST00000471996 LRRC75AQ8NAA5 344 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 TAMM41Q96BW9 452 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 ZNF583Q96ND8 569 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 WDR76Q9H967 626 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 TRIM36Q9NQ86 728 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 ATPIF1Q9UII2 106 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 RPUSD1Q9UJJ7 312 aaKnown RBP15.59■□□□□ 0.09
SORT1-203ENST00000471996 COL7A1Q02388 2944 aa15.59■□□□□ 0.09
SORT1-203ENST00000471996 TRAV38-1A0A0B4J264 116 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 H7C1C5 153 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 DVL1O14640 695 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 OR5F1O95221 314 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 EEF1B2P24534 225 aaKnown RBP15.58■□□□□ 0.08
SORT1-203ENST00000471996 LCN6P62502 163 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 EMX1Q04741 257 aaPredicted RBP15.58■□□□□ 0.08
SORT1-203ENST00000471996 OR8B8Q15620 311 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 CCBE1Q6UXH8 406 aaPredicted RBP15.58■□□□□ 0.08
SORT1-203ENST00000471996 DLEU7Q6UYE1 221 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 CALHM3Q86XJ0 350 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 SLC26A7Q8TE54 656 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 HCAR1Q9BXC0 346 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 CCDC167Q9P0B6 97 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 RIMS3Q9UJD0 308 aa15.58■□□□□ 0.08
SORT1-203ENST00000471996 OOEPA6NGQ2 149 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 K7EIL1 84 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 NPFFO15130 113 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 GYPAP02724 150 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 GUCA2AQ02747 115 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 NSUN5P1Q3KNT7 163 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 BEND6Q5SZJ8 279 aaPredicted RBP15.57■□□□□ 0.08
SORT1-203ENST00000471996 POLR2J2Q9GZM3 115 aaKnown RBP15.57■□□□□ 0.08
SORT1-203ENST00000471996 POLR2J3Q9H1A7 115 aaKnown RBP15.57■□□□□ 0.08
SORT1-203ENST00000471996 MMP28Q9H239 520 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 FN3KRPQ9HA64 309 aa15.57■□□□□ 0.08
SORT1-203ENST00000471996 RER1O15258 196 aa15.56■□□□□ 0.08
SORT1-203ENST00000471996 PAHP00439 452 aa15.56■□□□□ 0.08
SORT1-203ENST00000471996 PRSS12P56730 875 aa15.56■□□□□ 0.08
SORT1-203ENST00000471996 WDR4P57081 412 aaKnown RBP15.56■□□□□ 0.08
SORT1-203ENST00000471996 LSM6P62312 80 aaKnown RBP15.56■□□□□ 0.08
SORT1-203ENST00000471996 PIN1Q13526 163 aaPredicted RBP15.56■□□□□ 0.08
SORT1-203ENST00000471996 OTPQ5XKR4 325 aa15.56■□□□□ 0.08
SORT1-203ENST00000471996 WDR93Q6P2C0 686 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms