RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 ACSM4P0C7M7 580 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 T-ENOLP0DO92 83 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 SELEP16581 610 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 CPT2P23786 658 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 ERFP50548 548 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 MS4A2Q01362 244 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 GK3PQ14409 553 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 HLXQ14774 488 aaPredicted RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 SLC35F1Q5T1Q4 408 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 SHQ1Q6PI26 577 aaKnown RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 C1orf229Q6ZS94 237 aaPredicted RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 LRRC28Q86X40 367 aaPredicted RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 LNX2Q8N448 690 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 OR9Q2Q8NGE9 314 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 OR2T4Q8NH00 348 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 ZNF582Q96NG8 517 aaPredicted RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 OR2V2Q96R30 315 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 SIGLEC11Q96RL6 698 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 PITX2Q99697 317 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 ATF6BQ99941 703 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 SLC30A2Q9BRI3 323 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 TMPRSS13Q9BYE2 586 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 C1orf21Q9H246 121 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 PPP1R3CQ9UQK1 317 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 POLR3KQ9Y2Y1 108 aaPredicted RBP12.63□□□□□ -0.39
VPS8-221ENST00000471655 DYSFO75923 2080 aa12.63□□□□□ -0.39
VPS8-221ENST00000471655 ISPDA4D126 451 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 FSTL3O95633 263 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 AVPP01185 164 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 HLA-DQA2P01906 255 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 SBK2P0C263 348 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 ZNF823P16415 610 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
VPS8-221ENST00000471655 MICAQ29983 383 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 FAM98BQ52LJ0 330 aaKnown RBP12.62□□□□□ -0.39
VPS8-221ENST00000471655 CLEC12AQ5QGZ9 265 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 DCAF12L2Q5VW00 463 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 OR2T5Q6IEZ7 315 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 OR2T2Q6IF00 324 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 C1QL2Q7Z5L3 287 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 OR5AS1Q8N127 324 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 KLHL36Q8N4N3 616 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 SPICQ8N5J4 248 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 ATG16L2Q8NAA4 619 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 OR8D4Q8NGM9 314 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 OR2T29Q8NH02 315 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 ZFAND2BQ8WV99 257 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 ASB9Q96DX5 294 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 HCAR1Q9BXC0 346 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 DGCR6LQ9BY27 220 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 FN3KQ9H479 309 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 PATZ1Q9HBE1 687 aaKnown RBP12.62□□□□□ -0.39
VPS8-221ENST00000471655 GCM1Q9NP62 436 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 DCAF16Q9NXF7 216 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 FBN3Q75N90 2809 aa12.62□□□□□ -0.39
VPS8-221ENST00000471655 F5H5K5 113 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 TMEM178BH3BS89 294 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 FOXH1O75593 365 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 SRP9P49458 86 aaKnown RBP12.61□□□□□ -0.39
VPS8-221ENST00000471655 TPTEP56180 551 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 BTG1P62324 171 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 DBPQ10586 325 aaPredicted RBP12.61□□□□□ -0.39
VPS8-221ENST00000471655 TRAP1Q12931 704 aaKnown RBP12.61□□□□□ -0.39
VPS8-221ENST00000471655 PCK2Q16822 640 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 ZNF181Q2M3W8 571 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 CD300LDQ6UXZ3 194 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 USP43Q70EL4 1123 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 CYB561A3Q8NBI2 242 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 AQP11Q8NBQ7 271 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 SLC37A3Q8NCC5 494 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 MAP6Q96JE9 813 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 MEGF10Q96KG7 1140 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 RBM4Q9BWF3 364 aaKnown RBP12.61□□□□□ -0.39
VPS8-221ENST00000471655 REEP1Q9H902 201 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
VPS8-221ENST00000471655 TMEM100Q9NV29 134 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 TAS2R1Q9NYW7 299 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 PCDHB10Q9UN67 800 aa12.61□□□□□ -0.39
VPS8-221ENST00000471655 F5H0A9 414 aaPredicted RBP12.6□□□□□ -0.39
VPS8-221ENST00000471655 MLNRO43193 412 aa12.6□□□□□ -0.39
VPS8-221ENST00000471655 RAP2AP10114 183 aa12.6□□□□□ -0.39
VPS8-221ENST00000471655 HOXB6P17509 224 aaKnown RBP12.6□□□□□ -0.39
VPS8-221ENST00000471655 OTX1P32242 354 aaPredicted RBP12.6□□□□□ -0.39
VPS8-221ENST00000471655 PYCR1P32322 319 aa12.6□□□□□ -0.39
VPS8-221ENST00000471655 MDH2P40926 338 aaKnown RBP12.6□□□□□ -0.39
VPS8-221ENST00000471655 SLC6A9P48067 706 aa12.6□□□□□ -0.39
VPS8-221ENST00000471655 MMP16P51512 607 aa12.6□□□□□ -0.39
VPS8-221ENST00000471655 SLC25A1P53007 311 aa12.6□□□□□ -0.39
VPS8-221ENST00000471655 MALLQ13021 153 aa12.6□□□□□ -0.39
VPS8-221ENST00000471655 GK2Q14410 553 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms