RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 CCL1P22362 96 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 TGM4P49221 684 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 TGFBR3Q03167 851 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SCRN3Q0VDG4 424 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 INSL4Q14641 139 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SPHARQ15513 63 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 C1QTNF12Q5T7M4 302 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 CD200R1LQ6Q8B3 271 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 TMEM91Q6ZNR0 172 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 RFPL4BQ6ZWI9 263 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 DPPA2Q7Z7J5 298 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 KLBQ86Z14 1044 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 PHC2Q8IXK0 858 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 OR8B12Q8NGG6 310 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 OR2G2Q8NGZ5 317 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 MYDGFQ969H8 173 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SGK3Q96BR1 496 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 ATF6BQ99941 703 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 FGF23Q9GZV9 251 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-207ENST00000471342 HDHD2Q9H0R4 259 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 RBM38Q9H0Z9 239 aaKnown RBP8.53□□□□□ -1.04
SF3A1-207ENST00000471342 PPP1R3EQ9H7J1 279 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 ISYNA1Q9NPH2 558 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 KCNJ16Q9NPI9 418 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SCN3BQ9NY72 215 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 COQ3Q9NZJ6 369 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 LAMP5Q9UJQ1 280 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 AMDHD2Q9Y303 409 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 STARD10Q9Y365 291 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 LRRK2Q5S007 2527 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SPTBN1Q01082 2364 aaKnown RBP8.53□□□□□ -1.04
SF3A1-207ENST00000471342 USP9YO00507 2555 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-207ENST00000471342 A0A1B0GWJ7 208 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 MAGEA13PA6NCF6 341 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF878C9JN71 531 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF670-ZNF695F2Z2N8 137 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 J3QLW9 94 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 PLPP2O43688 288 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 DOK2O60496 412 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 LMX1BO60663 402 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 LILRA1O75019 489 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ZFPL1O95159 310 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 CD1AP06126 327 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 CD37P11049 281 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF19P17023 458 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 CD40P25942 277 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ARR3P36575 388 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 CRYBB2P43320 205 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 PRKXP51817 358 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 WNT4P56705 351 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF121P58317 390 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-207ENST00000471342 PSMA6P60900 246 aaKnown RBP8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ERVS71-1P61550 626 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ACTC1P68032 377 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ACTA1P68133 377 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 NAAAQ02083 359 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 CDK5R1Q15078 307 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 PPA1Q15181 289 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 SLC36A2Q495M3 483 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 NCMAPQ5T1S8 102 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 FOXB2Q5VYV0 432 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 UNQ9370/PRO34162Q6UXP9 181 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 KCTD20Q7Z5Y7 419 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 LYPD6Q86Y78 171 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ELMOD2Q8IZ81 293 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 RDH10Q8IZV5 341 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF295-AS1Q8N0V1 137 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 STX19Q8N4C7 294 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 ZFP41Q8N8Y5 198 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 OR51A4Q8NGJ6 313 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 OR13F1Q8NGS4 319 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 CA5BP1Q8WTZ4 195 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 IGFBPL1Q8WX77 278 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 NEUROG1Q92886 237 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 NAA50Q9GZZ1 169 aaKnown RBP8.52□□□□□ -1.05
SF3A1-207ENST00000471342 CCNB1IP1Q9NPC3 277 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 PLEK2Q9NYT0 353 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 RHBDD3Q9Y3P4 386 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 TMEM14AQ9Y6G1 99 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 R4GMQ9 66 aa8.52□□□□□ -1.05
SF3A1-207ENST00000471342 HRNRQ86YZ3 2850 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-207ENST00000471342 A0A087WXM4 84 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 TRBV5-5A0A0J9YX44 114 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 IRGMA1A4Y4 181 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 TRIM64BA6NI03 449 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 SNTNA6NMZ2 147 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 SMPD2O60906 423 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 FARS2O95363 451 aaKnown RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 CPEP16870 476 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 IL32P24001 234 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 ACKR3P25106 362 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 STOMP27105 288 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 PCSK6P29122 969 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF83P51522 516 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 IDH3GP51553 393 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 CCR9P51686 369 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 PCBD1P61457 104 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 BDH1Q02338 343 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 MLLT11Q13015 90 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 DAZAP2Q15038 168 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms